Protein–RNA interactions for Protein: Q96PB8

LRRC3B, Leucine-rich repeat-containing protein 3B, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3BQ96PB8 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
LRRC3BQ96PB8 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
LRRC3BQ96PB8 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC21.02■□□□□ 0.96
LRRC3BQ96PB8 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
LRRC3BQ96PB8 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
LRRC3BQ96PB8 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LRRC3BQ96PB8 RPS2P55-201ENST00000397318 883 ntBASIC21.02■□□□□ 0.96
LRRC3BQ96PB8 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
LRRC3BQ96PB8 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC21.02■□□□□ 0.96
LRRC3BQ96PB8 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
LRRC3BQ96PB8 AC107956.1-201ENST00000494359 873 ntBASIC21.02■□□□□ 0.96
LRRC3BQ96PB8 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC21.02■□□□□ 0.96
LRRC3BQ96PB8 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
LRRC3BQ96PB8 AC233702.5-201ENST00000584107 538 ntBASIC21.02■□□□□ 0.96
LRRC3BQ96PB8 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LRRC3BQ96PB8 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
LRRC3BQ96PB8 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC21.02■□□□□ 0.96
LRRC3BQ96PB8 STK25-205ENST00000405883 1904 ntTSL 2 BASIC21.02■□□□□ 0.95
LRRC3BQ96PB8 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
LRRC3BQ96PB8 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LRRC3BQ96PB8 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC21.01■□□□□ 0.95
LRRC3BQ96PB8 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
LRRC3BQ96PB8 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
LRRC3BQ96PB8 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC21.01■□□□□ 0.95
LRRC3BQ96PB8 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LRRC3BQ96PB8 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LRRC3BQ96PB8 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
LRRC3BQ96PB8 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LRRC3BQ96PB8 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LRRC3BQ96PB8 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC21.01■□□□□ 0.95
LRRC3BQ96PB8 ABHD17AP6-201ENST00000458502 1044 ntBASIC21.01■□□□□ 0.95
LRRC3BQ96PB8 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
LRRC3BQ96PB8 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
LRRC3BQ96PB8 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
LRRC3BQ96PB8 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
LRRC3BQ96PB8 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LRRC3BQ96PB8 AC011484.1-201ENST00000377652 1995 ntBASIC21.01■□□□□ 0.95
LRRC3BQ96PB8 ECEL1P3-201ENST00000427961 737 ntBASIC21■□□□□ 0.95
LRRC3BQ96PB8 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC21■□□□□ 0.95
LRRC3BQ96PB8 TSPY7P-201ENST00000431358 1114 ntBASIC21■□□□□ 0.95
LRRC3BQ96PB8 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC21■□□□□ 0.95
LRRC3BQ96PB8 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC21■□□□□ 0.95
LRRC3BQ96PB8 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC21■□□□□ 0.95
LRRC3BQ96PB8 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC21■□□□□ 0.95
LRRC3BQ96PB8 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC21■□□□□ 0.95
LRRC3BQ96PB8 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
LRRC3BQ96PB8 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC21■□□□□ 0.95
LRRC3BQ96PB8 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC21■□□□□ 0.95
LRRC3BQ96PB8 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC21■□□□□ 0.95
LRRC3BQ96PB8 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC21■□□□□ 0.95
LRRC3BQ96PB8 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
LRRC3BQ96PB8 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
LRRC3BQ96PB8 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
LRRC3BQ96PB8 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LRRC3BQ96PB8 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LRRC3BQ96PB8 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC20.99■□□□□ 0.95
LRRC3BQ96PB8 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LRRC3BQ96PB8 AC211429.1-201ENST00000415277 523 ntBASIC20.99■□□□□ 0.95
LRRC3BQ96PB8 AC012618.2-201ENST00000428058 849 ntBASIC20.99■□□□□ 0.95
LRRC3BQ96PB8 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC20.99■□□□□ 0.95
LRRC3BQ96PB8 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
LRRC3BQ96PB8 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC20.99■□□□□ 0.95
LRRC3BQ96PB8 AC073912.3-201ENST00000624414 853 ntBASIC20.99■□□□□ 0.95
LRRC3BQ96PB8 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.99■□□□□ 0.95
LRRC3BQ96PB8 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LRRC3BQ96PB8 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.99■□□□□ 0.95
LRRC3BQ96PB8 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC20.99■□□□□ 0.95
LRRC3BQ96PB8 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LRRC3BQ96PB8 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
LRRC3BQ96PB8 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LRRC3BQ96PB8 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LRRC3BQ96PB8 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LRRC3BQ96PB8 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
LRRC3BQ96PB8 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LRRC3BQ96PB8 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
LRRC3BQ96PB8 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
LRRC3BQ96PB8 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
LRRC3BQ96PB8 KRASP1-201ENST00000407852 552 ntBASIC20.98■□□□□ 0.95
LRRC3BQ96PB8 AC239809.2-201ENST00000415381 517 ntBASIC20.98■□□□□ 0.95
LRRC3BQ96PB8 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LRRC3BQ96PB8 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
LRRC3BQ96PB8 HES2-206ENST00000489730 730 ntTSL 2 BASIC20.98■□□□□ 0.95
LRRC3BQ96PB8 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
LRRC3BQ96PB8 REXO1L12P-201ENST00000622156 912 ntBASIC20.98■□□□□ 0.95
LRRC3BQ96PB8 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LRRC3BQ96PB8 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LRRC3BQ96PB8 AC244015.2-201ENST00000616358 1861 ntBASIC20.98■□□□□ 0.95
LRRC3BQ96PB8 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC20.98■□□□□ 0.95
LRRC3BQ96PB8 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
LRRC3BQ96PB8 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
LRRC3BQ96PB8 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
LRRC3BQ96PB8 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
LRRC3BQ96PB8 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
LRRC3BQ96PB8 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
LRRC3BQ96PB8 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
LRRC3BQ96PB8 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
LRRC3BQ96PB8 RER1-204ENST00000378518 522 ntTSL 3 BASIC20.97■□□□□ 0.95
LRRC3BQ96PB8 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC20.97■□□□□ 0.95
LRRC3BQ96PB8 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
LRRC3BQ96PB8 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms