Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
CALR3Q96L12 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC21.56■■□□□ 1.04
CALR3Q96L12 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC21.56■■□□□ 1.04
CALR3Q96L12 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CALR3Q96L12 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CALR3Q96L12 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CALR3Q96L12 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC21.56■■□□□ 1.04
CALR3Q96L12 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CALR3Q96L12 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CALR3Q96L12 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CALR3Q96L12 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CALR3Q96L12 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CALR3Q96L12 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
CALR3Q96L12 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC21.56■■□□□ 1.04
CALR3Q96L12 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CALR3Q96L12 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
CALR3Q96L12 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
CALR3Q96L12 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CALR3Q96L12 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
CALR3Q96L12 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
CALR3Q96L12 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CALR3Q96L12 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC21.55■■□□□ 1.04
CALR3Q96L12 AC112907.3-201ENST00000577781 2400 ntBASIC21.55■■□□□ 1.04
CALR3Q96L12 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CALR3Q96L12 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
CALR3Q96L12 AK1-201ENST00000223836 736 ntTSL 3 BASIC21.55■■□□□ 1.04
CALR3Q96L12 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
CALR3Q96L12 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
CALR3Q96L12 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CALR3Q96L12 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
CALR3Q96L12 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CALR3Q96L12 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CALR3Q96L12 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC21.55■■□□□ 1.04
CALR3Q96L12 MIR6084-201ENST00000622012 110 ntBASIC21.55■■□□□ 1.04
CALR3Q96L12 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC21.55■■□□□ 1.04
CALR3Q96L12 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CALR3Q96L12 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
CALR3Q96L12 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CALR3Q96L12 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
CALR3Q96L12 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC21.55■■□□□ 1.04
CALR3Q96L12 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
CALR3Q96L12 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
CALR3Q96L12 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CALR3Q96L12 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CALR3Q96L12 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CALR3Q96L12 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CALR3Q96L12 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CALR3Q96L12 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC21.54■■□□□ 1.04
CALR3Q96L12 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CALR3Q96L12 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CALR3Q96L12 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CALR3Q96L12 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CALR3Q96L12 AC123595.1-201ENST00000440769 1046 ntBASIC21.54■■□□□ 1.04
CALR3Q96L12 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CALR3Q96L12 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC21.54■■□□□ 1.04
CALR3Q96L12 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CALR3Q96L12 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
CALR3Q96L12 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC21.54■■□□□ 1.04
CALR3Q96L12 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC21.54■■□□□ 1.04
CALR3Q96L12 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC21.53■■□□□ 1.04
CALR3Q96L12 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC21.53■■□□□ 1.04
CALR3Q96L12 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CALR3Q96L12 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
CALR3Q96L12 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CALR3Q96L12 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
CALR3Q96L12 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CALR3Q96L12 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC21.53■■□□□ 1.04
CALR3Q96L12 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC21.53■■□□□ 1.04
CALR3Q96L12 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC21.53■■□□□ 1.04
CALR3Q96L12 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CALR3Q96L12 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
CALR3Q96L12 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC21.53■■□□□ 1.04
CALR3Q96L12 AP001160.3-201ENST00000601484 763 ntBASIC21.53■■□□□ 1.04
CALR3Q96L12 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
CALR3Q96L12 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC21.53■■□□□ 1.04
CALR3Q96L12 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CALR3Q96L12 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC21.53■■□□□ 1.04
CALR3Q96L12 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC21.53■■□□□ 1.04
CALR3Q96L12 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC21.52■■□□□ 1.04
CALR3Q96L12 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC21.52■■□□□ 1.04
CALR3Q96L12 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
CALR3Q96L12 SAPCD2P1-201ENST00000395413 1184 ntBASIC21.52■■□□□ 1.04
CALR3Q96L12 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
CALR3Q96L12 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
CALR3Q96L12 TCF3P1-201ENST00000423021 1937 ntBASIC21.52■■□□□ 1.04
CALR3Q96L12 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC21.52■■□□□ 1.04
CALR3Q96L12 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CALR3Q96L12 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC21.52■■□□□ 1.04
CALR3Q96L12 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CALR3Q96L12 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC21.52■■□□□ 1.04
CALR3Q96L12 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
CALR3Q96L12 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
CALR3Q96L12 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CALR3Q96L12 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CALR3Q96L12 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CALR3Q96L12 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CALR3Q96L12 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC21.51■■□□□ 1.03
CALR3Q96L12 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
CALR3Q96L12 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC21.51■■□□□ 1.03
CALR3Q96L12 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms