Protein–RNA interactions for Protein: Q96CU9

FOXRED1, FAD-dependent oxidoreductase domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1Q96CU9 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
FOXRED1Q96CU9 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
FOXRED1Q96CU9 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
FOXRED1Q96CU9 POU5F1P4-201ENST00000413175 1085 ntBASIC17.7■□□□□ 0.42
FOXRED1Q96CU9 ZNRF2P3-201ENST00000424200 374 ntBASIC17.7■□□□□ 0.42
FOXRED1Q96CU9 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
FOXRED1Q96CU9 STOX2-205ENST00000513034 807 ntTSL 3 BASIC17.7■□□□□ 0.42
FOXRED1Q96CU9 AC008175.2-201ENST00000612840 297 ntBASIC17.7■□□□□ 0.42
FOXRED1Q96CU9 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
FOXRED1Q96CU9 MFF-207ENST00000409565 1548 ntTSL 2 BASIC17.7■□□□□ 0.42
FOXRED1Q96CU9 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
FOXRED1Q96CU9 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
FOXRED1Q96CU9 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
FOXRED1Q96CU9 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
FOXRED1Q96CU9 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
FOXRED1Q96CU9 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
FOXRED1Q96CU9 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
FOXRED1Q96CU9 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC17.7■□□□□ 0.42
FOXRED1Q96CU9 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC17.69■□□□□ 0.42
FOXRED1Q96CU9 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
FOXRED1Q96CU9 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
FOXRED1Q96CU9 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
FOXRED1Q96CU9 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC17.69■□□□□ 0.42
FOXRED1Q96CU9 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
FOXRED1Q96CU9 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
FOXRED1Q96CU9 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
FOXRED1Q96CU9 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC17.69■□□□□ 0.42
FOXRED1Q96CU9 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC17.69■□□□□ 0.42
FOXRED1Q96CU9 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC17.69■□□□□ 0.42
FOXRED1Q96CU9 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC17.69■□□□□ 0.42
FOXRED1Q96CU9 RHOF-204ENST00000537265 699 ntTSL 2 BASIC17.69■□□□□ 0.42
FOXRED1Q96CU9 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC17.69■□□□□ 0.42
FOXRED1Q96CU9 PCDHAC2-203ENST00000615316 3011 ntBASIC17.69■□□□□ 0.42
FOXRED1Q96CU9 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
FOXRED1Q96CU9 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
FOXRED1Q96CU9 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.69■□□□□ 0.42
FOXRED1Q96CU9 AC061975.6-201ENST00000579045 1553 ntBASIC17.69■□□□□ 0.42
FOXRED1Q96CU9 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
FOXRED1Q96CU9 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
FOXRED1Q96CU9 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
FOXRED1Q96CU9 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
FOXRED1Q96CU9 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
FOXRED1Q96CU9 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
FOXRED1Q96CU9 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
FOXRED1Q96CU9 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC17.69■□□□□ 0.42
FOXRED1Q96CU9 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
FOXRED1Q96CU9 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
FOXRED1Q96CU9 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
FOXRED1Q96CU9 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC17.68■□□□□ 0.42
FOXRED1Q96CU9 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
FOXRED1Q96CU9 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
FOXRED1Q96CU9 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
FOXRED1Q96CU9 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC17.68■□□□□ 0.42
FOXRED1Q96CU9 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC17.68■□□□□ 0.42
FOXRED1Q96CU9 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC17.68■□□□□ 0.42
FOXRED1Q96CU9 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
FOXRED1Q96CU9 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
FOXRED1Q96CU9 MIR572-201ENST00000384983 95 ntBASIC17.68■□□□□ 0.42
FOXRED1Q96CU9 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
FOXRED1Q96CU9 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC17.68■□□□□ 0.42
FOXRED1Q96CU9 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC17.68■□□□□ 0.42
FOXRED1Q96CU9 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC17.68■□□□□ 0.42
FOXRED1Q96CU9 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
FOXRED1Q96CU9 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
FOXRED1Q96CU9 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC17.68■□□□□ 0.42
FOXRED1Q96CU9 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC17.68■□□□□ 0.42
FOXRED1Q96CU9 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC17.67■□□□□ 0.42
FOXRED1Q96CU9 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
FOXRED1Q96CU9 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
FOXRED1Q96CU9 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC17.67■□□□□ 0.42
FOXRED1Q96CU9 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
FOXRED1Q96CU9 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
FOXRED1Q96CU9 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
FOXRED1Q96CU9 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
FOXRED1Q96CU9 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
FOXRED1Q96CU9 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC17.67■□□□□ 0.42
FOXRED1Q96CU9 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
FOXRED1Q96CU9 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC17.67■□□□□ 0.42
FOXRED1Q96CU9 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
FOXRED1Q96CU9 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
FOXRED1Q96CU9 NME4-202ENST00000382940 766 ntTSL 3 BASIC17.67■□□□□ 0.42
FOXRED1Q96CU9 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC17.67■□□□□ 0.42
FOXRED1Q96CU9 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
FOXRED1Q96CU9 NME4-211ENST00000620944 1193 ntTSL 2 BASIC17.67■□□□□ 0.42
FOXRED1Q96CU9 AL358852.1-201ENST00000623174 1268 ntBASIC17.67■□□□□ 0.42
FOXRED1Q96CU9 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
FOXRED1Q96CU9 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
FOXRED1Q96CU9 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
FOXRED1Q96CU9 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
FOXRED1Q96CU9 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
FOXRED1Q96CU9 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
FOXRED1Q96CU9 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC17.67■□□□□ 0.42
FOXRED1Q96CU9 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
FOXRED1Q96CU9 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC17.67■□□□□ 0.42
FOXRED1Q96CU9 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
FOXRED1Q96CU9 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
FOXRED1Q96CU9 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC17.66■□□□□ 0.42
FOXRED1Q96CU9 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
FOXRED1Q96CU9 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
FOXRED1Q96CU9 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms