Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CPNE4Q96A23 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CPNE4Q96A23 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
CPNE4Q96A23 AC027702.1-201ENST00000563810 1770 ntBASIC18.32■□□□□ 0.52
CPNE4Q96A23 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CPNE4Q96A23 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CPNE4Q96A23 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CPNE4Q96A23 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC18.32■□□□□ 0.52
CPNE4Q96A23 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CPNE4Q96A23 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CPNE4Q96A23 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CPNE4Q96A23 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CPNE4Q96A23 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
CPNE4Q96A23 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CPNE4Q96A23 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CPNE4Q96A23 AC007375.3-201ENST00000600936 2314 ntBASIC18.31■□□□□ 0.52
CPNE4Q96A23 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CPNE4Q96A23 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CPNE4Q96A23 SERPINH1P1-201ENST00000419794 1249 ntBASIC18.31■□□□□ 0.52
CPNE4Q96A23 AC073210.2-201ENST00000430369 194 ntBASIC18.31■□□□□ 0.52
CPNE4Q96A23 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC18.31■□□□□ 0.52
CPNE4Q96A23 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC18.31■□□□□ 0.52
CPNE4Q96A23 EMC9-206ENST00000560403 872 ntTSL 2 BASIC18.31■□□□□ 0.52
CPNE4Q96A23 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC18.31■□□□□ 0.52
CPNE4Q96A23 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC18.31■□□□□ 0.52
CPNE4Q96A23 AC133041.1-202ENST00000642053 222 ntBASIC18.31■□□□□ 0.52
CPNE4Q96A23 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CPNE4Q96A23 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CPNE4Q96A23 ERF-202ENST00000440177 2032 ntTSL 2 BASIC18.31■□□□□ 0.52
CPNE4Q96A23 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CPNE4Q96A23 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CPNE4Q96A23 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CPNE4Q96A23 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC18.31■□□□□ 0.52
CPNE4Q96A23 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CPNE4Q96A23 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CPNE4Q96A23 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CPNE4Q96A23 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC18.3■□□□□ 0.52
CPNE4Q96A23 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CPNE4Q96A23 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC18.3■□□□□ 0.52
CPNE4Q96A23 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CPNE4Q96A23 AC005229.4-201ENST00000610085 2198 ntBASIC18.3■□□□□ 0.52
CPNE4Q96A23 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC18.3■□□□□ 0.52
CPNE4Q96A23 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CPNE4Q96A23 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CPNE4Q96A23 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC18.3■□□□□ 0.52
CPNE4Q96A23 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC18.3■□□□□ 0.52
CPNE4Q96A23 AL355472.2-201ENST00000422958 438 ntBASIC18.3■□□□□ 0.52
CPNE4Q96A23 RGMA-211ENST00000557420 989 ntTSL 3 BASIC18.3■□□□□ 0.52
CPNE4Q96A23 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC18.3■□□□□ 0.52
CPNE4Q96A23 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CPNE4Q96A23 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC18.3■□□□□ 0.52
CPNE4Q96A23 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CPNE4Q96A23 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CPNE4Q96A23 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CPNE4Q96A23 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CPNE4Q96A23 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CPNE4Q96A23 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CPNE4Q96A23 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC18.3■□□□□ 0.52
CPNE4Q96A23 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC18.3■□□□□ 0.52
CPNE4Q96A23 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CPNE4Q96A23 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CPNE4Q96A23 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CPNE4Q96A23 GCK-205ENST00000437084 1385 ntTSL 5 BASIC18.3■□□□□ 0.52
CPNE4Q96A23 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CPNE4Q96A23 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CPNE4Q96A23 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CPNE4Q96A23 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CPNE4Q96A23 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CPNE4Q96A23 AC069152.1-201ENST00000438030 544 ntBASIC18.29■□□□□ 0.52
CPNE4Q96A23 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC18.29■□□□□ 0.52
CPNE4Q96A23 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC18.29■□□□□ 0.52
CPNE4Q96A23 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC18.29■□□□□ 0.52
CPNE4Q96A23 AL138781.1-201ENST00000566567 1274 ntBASIC18.29■□□□□ 0.52
CPNE4Q96A23 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC18.29■□□□□ 0.52
CPNE4Q96A23 AC105020.6-201ENST00000621523 1217 ntBASIC18.29■□□□□ 0.52
CPNE4Q96A23 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
CPNE4Q96A23 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
CPNE4Q96A23 PLK5-205ENST00000642079 1969 ntBASIC18.29■□□□□ 0.52
CPNE4Q96A23 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CPNE4Q96A23 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
CPNE4Q96A23 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CPNE4Q96A23 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CPNE4Q96A23 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC18.29■□□□□ 0.52
CPNE4Q96A23 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CPNE4Q96A23 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CPNE4Q96A23 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CPNE4Q96A23 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CPNE4Q96A23 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC18.28■□□□□ 0.52
CPNE4Q96A23 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CPNE4Q96A23 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC18.28■□□□□ 0.52
CPNE4Q96A23 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
CPNE4Q96A23 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
CPNE4Q96A23 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC18.28■□□□□ 0.52
CPNE4Q96A23 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC18.28■□□□□ 0.52
CPNE4Q96A23 PPP1R14BP2-201ENST00000426284 444 ntBASIC18.28■□□□□ 0.52
CPNE4Q96A23 HES2-205ENST00000487437 968 ntTSL 3 BASIC18.28■□□□□ 0.52
CPNE4Q96A23 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC18.28■□□□□ 0.52
CPNE4Q96A23 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC18.28■□□□□ 0.52
CPNE4Q96A23 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC18.28■□□□□ 0.52
CPNE4Q96A23 AL356652.1-201ENST00000615962 565 ntBASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms