Protein–RNA interactions for Protein: Q92529

SHC3, SHC-transforming protein 3, humanhuman

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC3Q92529 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC21.83■■□□□ 1.09
SHC3Q92529 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SHC3Q92529 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
SHC3Q92529 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC21.83■■□□□ 1.09
SHC3Q92529 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
SHC3Q92529 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SHC3Q92529 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC21.83■■□□□ 1.08
SHC3Q92529 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
SHC3Q92529 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC21.83■■□□□ 1.08
SHC3Q92529 CYP21A1P-202ENST00000354927 1481 ntBASIC21.83■■□□□ 1.08
SHC3Q92529 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC21.83■■□□□ 1.08
SHC3Q92529 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
SHC3Q92529 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.08
SHC3Q92529 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC21.82■■□□□ 1.08
SHC3Q92529 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
SHC3Q92529 AC087633.2-202ENST00000565166 1439 ntBASIC21.82■■□□□ 1.08
SHC3Q92529 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC21.82■■□□□ 1.08
SHC3Q92529 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SHC3Q92529 RARRES2P4-201ENST00000514074 484 ntBASIC21.82■■□□□ 1.08
SHC3Q92529 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC21.82■■□□□ 1.08
SHC3Q92529 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SHC3Q92529 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.82■■□□□ 1.08
SHC3Q92529 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SHC3Q92529 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
SHC3Q92529 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
SHC3Q92529 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SHC3Q92529 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SHC3Q92529 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SHC3Q92529 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
SHC3Q92529 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SHC3Q92529 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
SHC3Q92529 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
SHC3Q92529 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SHC3Q92529 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
SHC3Q92529 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SHC3Q92529 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SHC3Q92529 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
SHC3Q92529 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
SHC3Q92529 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC21.81■■□□□ 1.08
SHC3Q92529 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC21.81■■□□□ 1.08
SHC3Q92529 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
SHC3Q92529 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
SHC3Q92529 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SHC3Q92529 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC21.81■■□□□ 1.08
SHC3Q92529 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SHC3Q92529 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
SHC3Q92529 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SHC3Q92529 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SHC3Q92529 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC21.8■■□□□ 1.08
SHC3Q92529 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
SHC3Q92529 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
SHC3Q92529 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC21.8■■□□□ 1.08
SHC3Q92529 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC21.8■■□□□ 1.08
SHC3Q92529 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC21.8■■□□□ 1.08
SHC3Q92529 PARP1-210ENST00000629232 477 ntTSL 5 BASIC21.8■■□□□ 1.08
SHC3Q92529 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC21.8■■□□□ 1.08
SHC3Q92529 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC21.8■■□□□ 1.08
SHC3Q92529 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SHC3Q92529 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC21.8■■□□□ 1.08
SHC3Q92529 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC21.8■■□□□ 1.08
SHC3Q92529 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SHC3Q92529 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
SHC3Q92529 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC21.8■■□□□ 1.08
SHC3Q92529 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC21.79■■□□□ 1.08
SHC3Q92529 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SHC3Q92529 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC21.79■■□□□ 1.08
SHC3Q92529 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
SHC3Q92529 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC21.79■■□□□ 1.08
SHC3Q92529 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
SHC3Q92529 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SHC3Q92529 APTR-203ENST00000430801 583 ntTSL 5 BASIC21.79■■□□□ 1.08
SHC3Q92529 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC21.79■■□□□ 1.08
SHC3Q92529 AC231657.2-201ENST00000624556 255 ntBASIC21.79■■□□□ 1.08
SHC3Q92529 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC21.79■■□□□ 1.08
SHC3Q92529 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC21.79■■□□□ 1.08
SHC3Q92529 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC21.79■■□□□ 1.08
SHC3Q92529 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SHC3Q92529 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC21.79■■□□□ 1.08
SHC3Q92529 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC21.79■■□□□ 1.08
SHC3Q92529 MED17-221ENST00000639724 2317 ntTSL 5 BASIC21.79■■□□□ 1.08
SHC3Q92529 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC21.79■■□□□ 1.08
SHC3Q92529 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC21.79■■□□□ 1.08
SHC3Q92529 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SHC3Q92529 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SHC3Q92529 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SHC3Q92529 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SHC3Q92529 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC21.78■■□□□ 1.08
SHC3Q92529 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
SHC3Q92529 CYP2T1P-201ENST00000432607 1285 ntBASIC21.78■■□□□ 1.08
SHC3Q92529 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC21.78■■□□□ 1.08
SHC3Q92529 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC21.78■■□□□ 1.08
SHC3Q92529 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
SHC3Q92529 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC21.78■■□□□ 1.08
SHC3Q92529 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
SHC3Q92529 IKBKGP1-201ENST00000612193 1073 ntBASIC21.78■■□□□ 1.08
SHC3Q92529 AL356652.1-201ENST00000615962 565 ntBASIC21.78■■□□□ 1.08
SHC3Q92529 AC100791.3-201ENST00000617619 330 ntBASIC21.78■■□□□ 1.08
SHC3Q92529 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
SHC3Q92529 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SHC3Q92529 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms