Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 AP002982.1-201ENST00000492365 877 ntBASIC8.4□□□□□ -1.06
SYNE2Q8WXH0 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC8.4□□□□□ -1.06
SYNE2Q8WXH0 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC8.4□□□□□ -1.06
SYNE2Q8WXH0 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC8.4□□□□□ -1.06
SYNE2Q8WXH0 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC8.4□□□□□ -1.06
SYNE2Q8WXH0 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
SYNE2Q8WXH0 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC8.4□□□□□ -1.06
SYNE2Q8WXH0 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC8.4□□□□□ -1.06
SYNE2Q8WXH0 AC053503.5-201ENST00000601508 636 ntBASIC8.4□□□□□ -1.06
SYNE2Q8WXH0 FAM21FP-204ENST00000608637 956 ntBASIC8.4□□□□□ -1.06
SYNE2Q8WXH0 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
SYNE2Q8WXH0 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
SYNE2Q8WXH0 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
SYNE2Q8WXH0 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
SYNE2Q8WXH0 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC8.4□□□□□ -1.06
SYNE2Q8WXH0 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC8.4□□□□□ -1.06
SYNE2Q8WXH0 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.06
SYNE2Q8WXH0 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC8.4□□□□□ -1.06
SYNE2Q8WXH0 TPSP2-201ENST00000561760 610 ntBASIC8.4□□□□□ -1.06
SYNE2Q8WXH0 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC8.4□□□□□ -1.06
SYNE2Q8WXH0 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC8.4□□□□□ -1.06
SYNE2Q8WXH0 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
SYNE2Q8WXH0 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC8.4□□□□□ -1.06
SYNE2Q8WXH0 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC8.4□□□□□ -1.06
SYNE2Q8WXH0 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.06
SYNE2Q8WXH0 CR392000.1-201ENST00000624770 1228 ntBASIC8.4□□□□□ -1.06
SYNE2Q8WXH0 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC8.4□□□□□ -1.06
SYNE2Q8WXH0 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC8.4□□□□□ -1.07
SYNE2Q8WXH0 FIS1-203ENST00000442303 631 ntTSL 3 BASIC8.4□□□□□ -1.07
SYNE2Q8WXH0 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC8.4□□□□□ -1.07
SYNE2Q8WXH0 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC8.4□□□□□ -1.07
SYNE2Q8WXH0 AP001160.2-201ENST00000596071 487 ntBASIC8.4□□□□□ -1.07
SYNE2Q8WXH0 AC120498.10-201ENST00000621827 505 ntBASIC8.4□□□□□ -1.07
SYNE2Q8WXH0 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC8.4□□□□□ -1.07
SYNE2Q8WXH0 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC8.4□□□□□ -1.07
SYNE2Q8WXH0 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
SYNE2Q8WXH0 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
SYNE2Q8WXH0 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC8.4□□□□□ -1.07
SYNE2Q8WXH0 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
SYNE2Q8WXH0 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC8.4□□□□□ -1.07
SYNE2Q8WXH0 KRT16P5-201ENST00000455284 522 ntBASIC8.4□□□□□ -1.07
SYNE2Q8WXH0 HYMAI.1-201ENST00000620949 238 ntBASIC8.4□□□□□ -1.07
SYNE2Q8WXH0 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC8.4□□□□□ -1.07
SYNE2Q8WXH0 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
SYNE2Q8WXH0 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
SYNE2Q8WXH0 AC098831.1-202ENST00000438821 336 ntBASIC8.39□□□□□ -1.07
SYNE2Q8WXH0 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC8.39□□□□□ -1.07
SYNE2Q8WXH0 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC8.39□□□□□ -1.07
SYNE2Q8WXH0 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC8.39□□□□□ -1.07
SYNE2Q8WXH0 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC8.39□□□□□ -1.07
SYNE2Q8WXH0 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
SYNE2Q8WXH0 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
SYNE2Q8WXH0 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC8.39□□□□□ -1.07
SYNE2Q8WXH0 TBCB-205ENST00000585746 875 ntTSL 3 BASIC8.39□□□□□ -1.07
SYNE2Q8WXH0 BX640515.1-201ENST00000617215 977 ntBASIC8.39□□□□□ -1.07
SYNE2Q8WXH0 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC8.39□□□□□ -1.07
SYNE2Q8WXH0 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
SYNE2Q8WXH0 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC8.39□□□□□ -1.07
SYNE2Q8WXH0 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC8.39□□□□□ -1.07
SYNE2Q8WXH0 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC8.39□□□□□ -1.07
SYNE2Q8WXH0 VPS51-217ENST00000639871 243 ntTSL 5 BASIC8.39□□□□□ -1.07
SYNE2Q8WXH0 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
SYNE2Q8WXH0 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
SYNE2Q8WXH0 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC8.39□□□□□ -1.07
SYNE2Q8WXH0 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC8.39□□□□□ -1.07
SYNE2Q8WXH0 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
SYNE2Q8WXH0 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
SYNE2Q8WXH0 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
SYNE2Q8WXH0 KRT18P68-201ENST00000392293 1000 ntBASIC8.39□□□□□ -1.07
SYNE2Q8WXH0 RPS8P6-201ENST00000426177 609 ntBASIC8.39□□□□□ -1.07
SYNE2Q8WXH0 AC104819.1-201ENST00000504587 486 ntBASIC8.39□□□□□ -1.07
SYNE2Q8WXH0 ETFA-216ENST00000560726 942 ntTSL 3 BASIC8.39□□□□□ -1.07
SYNE2Q8WXH0 AL035252.4-201ENST00000624174 288 ntBASIC8.39□□□□□ -1.07
SYNE2Q8WXH0 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
SYNE2Q8WXH0 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
SYNE2Q8WXH0 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC8.39□□□□□ -1.07
SYNE2Q8WXH0 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC8.39□□□□□ -1.07
SYNE2Q8WXH0 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
SYNE2Q8WXH0 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC8.39□□□□□ -1.07
SYNE2Q8WXH0 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC8.39□□□□□ -1.07
SYNE2Q8WXH0 RNA5SP419-201ENST00000515908 135 ntBASIC8.39□□□□□ -1.07
SYNE2Q8WXH0 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC8.39□□□□□ -1.07
SYNE2Q8WXH0 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
SYNE2Q8WXH0 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
SYNE2Q8WXH0 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC8.39□□□□□ -1.07
SYNE2Q8WXH0 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
SYNE2Q8WXH0 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC8.38□□□□□ -1.07
SYNE2Q8WXH0 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
SYNE2Q8WXH0 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
SYNE2Q8WXH0 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
SYNE2Q8WXH0 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
SYNE2Q8WXH0 HMGA1P5-201ENST00000412453 271 ntBASIC8.38□□□□□ -1.07
SYNE2Q8WXH0 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC8.38□□□□□ -1.07
SYNE2Q8WXH0 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC8.38□□□□□ -1.07
SYNE2Q8WXH0 MIR1199-201ENST00000621445 119 ntBASIC8.38□□□□□ -1.07
SYNE2Q8WXH0 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC8.38□□□□□ -1.07
SYNE2Q8WXH0 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC8.38□□□□□ -1.07
SYNE2Q8WXH0 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
SYNE2Q8WXH0 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
SYNE2Q8WXH0 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms