Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PTCD2Q8WV60 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
PTCD2Q8WV60 AC013268.1-206ENST00000638368 961 ntBASIC20.65■□□□□ 0.9
PTCD2Q8WV60 AC112229.1-201ENST00000639295 961 ntBASIC20.65■□□□□ 0.9
PTCD2Q8WV60 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PTCD2Q8WV60 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
PTCD2Q8WV60 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.65■□□□□ 0.9
PTCD2Q8WV60 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PTCD2Q8WV60 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
PTCD2Q8WV60 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
PTCD2Q8WV60 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
PTCD2Q8WV60 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PTCD2Q8WV60 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PTCD2Q8WV60 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.64■□□□□ 0.89
PTCD2Q8WV60 AC083906.2-201ENST00000511578 360 ntBASIC20.64■□□□□ 0.89
PTCD2Q8WV60 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.64■□□□□ 0.89
PTCD2Q8WV60 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.64■□□□□ 0.89
PTCD2Q8WV60 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PTCD2Q8WV60 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.64■□□□□ 0.89
PTCD2Q8WV60 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PTCD2Q8WV60 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
PTCD2Q8WV60 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PTCD2Q8WV60 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.63■□□□□ 0.89
PTCD2Q8WV60 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC20.63■□□□□ 0.89
PTCD2Q8WV60 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC20.63■□□□□ 0.89
PTCD2Q8WV60 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PTCD2Q8WV60 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
PTCD2Q8WV60 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC20.63■□□□□ 0.89
PTCD2Q8WV60 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.63■□□□□ 0.89
PTCD2Q8WV60 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PTCD2Q8WV60 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PTCD2Q8WV60 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PTCD2Q8WV60 GPX1P1-201ENST00000388829 606 ntBASIC20.63■□□□□ 0.89
PTCD2Q8WV60 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.63■□□□□ 0.89
PTCD2Q8WV60 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC20.63■□□□□ 0.89
PTCD2Q8WV60 CYP2T1P-201ENST00000432607 1285 ntBASIC20.63■□□□□ 0.89
PTCD2Q8WV60 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.63■□□□□ 0.89
PTCD2Q8WV60 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PTCD2Q8WV60 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PTCD2Q8WV60 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PTCD2Q8WV60 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
PTCD2Q8WV60 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
PTCD2Q8WV60 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
PTCD2Q8WV60 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
PTCD2Q8WV60 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.63■□□□□ 0.89
PTCD2Q8WV60 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
PTCD2Q8WV60 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.62■□□□□ 0.89
PTCD2Q8WV60 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PTCD2Q8WV60 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PTCD2Q8WV60 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC20.62■□□□□ 0.89
PTCD2Q8WV60 RNF165-205ENST00000588679 2904 ntBASIC20.62■□□□□ 0.89
PTCD2Q8WV60 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PTCD2Q8WV60 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PTCD2Q8WV60 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
PTCD2Q8WV60 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.62■□□□□ 0.89
PTCD2Q8WV60 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PTCD2Q8WV60 AL355802.2-201ENST00000402069 882 ntBASIC20.62■□□□□ 0.89
PTCD2Q8WV60 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC20.62■□□□□ 0.89
PTCD2Q8WV60 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PTCD2Q8WV60 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PTCD2Q8WV60 AL121832.2-201ENST00000610979 668 ntBASIC20.62■□□□□ 0.89
PTCD2Q8WV60 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
PTCD2Q8WV60 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
PTCD2Q8WV60 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PTCD2Q8WV60 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PTCD2Q8WV60 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PTCD2Q8WV60 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PTCD2Q8WV60 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PTCD2Q8WV60 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC20.62■□□□□ 0.89
PTCD2Q8WV60 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PTCD2Q8WV60 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.61■□□□□ 0.89
PTCD2Q8WV60 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.61■□□□□ 0.89
PTCD2Q8WV60 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
PTCD2Q8WV60 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
PTCD2Q8WV60 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PTCD2Q8WV60 AC007322.3-201ENST00000426526 701 ntBASIC20.61■□□□□ 0.89
PTCD2Q8WV60 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC20.61■□□□□ 0.89
PTCD2Q8WV60 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC20.61■□□□□ 0.89
PTCD2Q8WV60 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC20.61■□□□□ 0.89
PTCD2Q8WV60 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
PTCD2Q8WV60 MIR2861-201ENST00000636310 90 ntBASIC20.61■□□□□ 0.89
PTCD2Q8WV60 AC092667.1-201ENST00000434301 2586 ntBASIC20.61■□□□□ 0.89
PTCD2Q8WV60 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PTCD2Q8WV60 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PTCD2Q8WV60 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
PTCD2Q8WV60 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
PTCD2Q8WV60 AC073130.3-201ENST00000624389 2278 ntBASIC20.6■□□□□ 0.89
PTCD2Q8WV60 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PTCD2Q8WV60 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PTCD2Q8WV60 TSPY6P-201ENST00000448518 926 ntBASIC20.6■□□□□ 0.89
PTCD2Q8WV60 AC007322.4-201ENST00000509611 723 ntBASIC20.6■□□□□ 0.89
PTCD2Q8WV60 OAS3-207ENST00000551007 998 ntTSL 2 BASIC20.6■□□□□ 0.89
PTCD2Q8WV60 EMC9-206ENST00000560403 872 ntTSL 2 BASIC20.6■□□□□ 0.89
PTCD2Q8WV60 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC20.6■□□□□ 0.89
PTCD2Q8WV60 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
PTCD2Q8WV60 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PTCD2Q8WV60 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.6■□□□□ 0.89
PTCD2Q8WV60 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
PTCD2Q8WV60 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
PTCD2Q8WV60 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms