Protein–RNA interactions for Protein: Q8TBE1

CNIH3, Protein cornichon homolog 3, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH3Q8TBE1 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CNIH3Q8TBE1 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
CNIH3Q8TBE1 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CNIH3Q8TBE1 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CNIH3Q8TBE1 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
CNIH3Q8TBE1 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CNIH3Q8TBE1 SLC47A1P1-202ENST00000449666 945 ntBASIC18.62■□□□□ 0.57
CNIH3Q8TBE1 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CNIH3Q8TBE1 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CNIH3Q8TBE1 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
CNIH3Q8TBE1 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CNIH3Q8TBE1 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CNIH3Q8TBE1 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18.62■□□□□ 0.57
CNIH3Q8TBE1 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
CNIH3Q8TBE1 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CNIH3Q8TBE1 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CNIH3Q8TBE1 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CNIH3Q8TBE1 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CNIH3Q8TBE1 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CNIH3Q8TBE1 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.61■□□□□ 0.57
CNIH3Q8TBE1 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.61■□□□□ 0.57
CNIH3Q8TBE1 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.61■□□□□ 0.57
CNIH3Q8TBE1 AC005332.7-201ENST00000614046 2005 ntBASIC18.61■□□□□ 0.57
CNIH3Q8TBE1 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CNIH3Q8TBE1 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CNIH3Q8TBE1 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.61■□□□□ 0.57
CNIH3Q8TBE1 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CNIH3Q8TBE1 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CNIH3Q8TBE1 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CNIH3Q8TBE1 STAC-204ENST00000457375 1366 ntTSL 2 BASIC18.61■□□□□ 0.57
CNIH3Q8TBE1 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CNIH3Q8TBE1 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
CNIH3Q8TBE1 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CNIH3Q8TBE1 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC18.61■□□□□ 0.57
CNIH3Q8TBE1 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.61■□□□□ 0.57
CNIH3Q8TBE1 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
CNIH3Q8TBE1 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CNIH3Q8TBE1 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CNIH3Q8TBE1 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
CNIH3Q8TBE1 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC18.61■□□□□ 0.57
CNIH3Q8TBE1 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CNIH3Q8TBE1 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC18.61■□□□□ 0.57
CNIH3Q8TBE1 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CNIH3Q8TBE1 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CNIH3Q8TBE1 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
CNIH3Q8TBE1 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CNIH3Q8TBE1 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CNIH3Q8TBE1 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
CNIH3Q8TBE1 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18.6■□□□□ 0.57
CNIH3Q8TBE1 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CNIH3Q8TBE1 HES6-206ENST00000409574 738 ntTSL 2 BASIC18.6■□□□□ 0.57
CNIH3Q8TBE1 PTCHD3P2-201ENST00000424937 1205 ntBASIC18.6■□□□□ 0.57
CNIH3Q8TBE1 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC18.6■□□□□ 0.57
CNIH3Q8TBE1 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC18.6■□□□□ 0.57
CNIH3Q8TBE1 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC18.6■□□□□ 0.57
CNIH3Q8TBE1 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.6■□□□□ 0.57
CNIH3Q8TBE1 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
CNIH3Q8TBE1 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CNIH3Q8TBE1 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CNIH3Q8TBE1 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CNIH3Q8TBE1 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CNIH3Q8TBE1 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CNIH3Q8TBE1 SYT6-210ENST00000641643 1587 ntBASIC18.59■□□□□ 0.57
CNIH3Q8TBE1 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CNIH3Q8TBE1 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CNIH3Q8TBE1 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.59■□□□□ 0.57
CNIH3Q8TBE1 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.59■□□□□ 0.57
CNIH3Q8TBE1 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.59■□□□□ 0.57
CNIH3Q8TBE1 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CNIH3Q8TBE1 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CNIH3Q8TBE1 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC18.59■□□□□ 0.57
CNIH3Q8TBE1 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.59■□□□□ 0.57
CNIH3Q8TBE1 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CNIH3Q8TBE1 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CNIH3Q8TBE1 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
CNIH3Q8TBE1 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CNIH3Q8TBE1 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.59■□□□□ 0.57
CNIH3Q8TBE1 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CNIH3Q8TBE1 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.59■□□□□ 0.57
CNIH3Q8TBE1 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
CNIH3Q8TBE1 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CNIH3Q8TBE1 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
CNIH3Q8TBE1 AC092171.4-201ENST00000609130 632 ntBASIC18.59■□□□□ 0.57
CNIH3Q8TBE1 RASSF1-AS1-201ENST00000629828 790 ntBASIC18.59■□□□□ 0.57
CNIH3Q8TBE1 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
CNIH3Q8TBE1 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC18.59■□□□□ 0.57
CNIH3Q8TBE1 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CNIH3Q8TBE1 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
CNIH3Q8TBE1 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CNIH3Q8TBE1 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CNIH3Q8TBE1 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CNIH3Q8TBE1 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC18.59■□□□□ 0.57
CNIH3Q8TBE1 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CNIH3Q8TBE1 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CNIH3Q8TBE1 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC18.59■□□□□ 0.57
CNIH3Q8TBE1 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
CNIH3Q8TBE1 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.59■□□□□ 0.57
CNIH3Q8TBE1 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CNIH3Q8TBE1 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CNIH3Q8TBE1 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms