Protein–RNA interactions for Protein: Q8TB33

LINC01560, Putative uncharacterized protein encoded by LINC01560, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560Q8TB33 GXYLT1P3-201ENST00000453058 1193 ntBASIC17.73■□□□□ 0.43
LINC01560Q8TB33 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
LINC01560Q8TB33 ABHD17AP6-201ENST00000458502 1044 ntBASIC17.73■□□□□ 0.43
LINC01560Q8TB33 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC17.73■□□□□ 0.43
LINC01560Q8TB33 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
LINC01560Q8TB33 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC17.73■□□□□ 0.43
LINC01560Q8TB33 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LINC01560Q8TB33 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
LINC01560Q8TB33 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
LINC01560Q8TB33 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
LINC01560Q8TB33 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LINC01560Q8TB33 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC17.73■□□□□ 0.43
LINC01560Q8TB33 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LINC01560Q8TB33 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LINC01560Q8TB33 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LINC01560Q8TB33 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC17.72■□□□□ 0.43
LINC01560Q8TB33 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
LINC01560Q8TB33 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LINC01560Q8TB33 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LINC01560Q8TB33 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC17.72■□□□□ 0.43
LINC01560Q8TB33 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LINC01560Q8TB33 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LINC01560Q8TB33 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
LINC01560Q8TB33 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC17.72■□□□□ 0.43
LINC01560Q8TB33 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LINC01560Q8TB33 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LINC01560Q8TB33 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC17.72■□□□□ 0.43
LINC01560Q8TB33 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
LINC01560Q8TB33 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LINC01560Q8TB33 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LINC01560Q8TB33 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
LINC01560Q8TB33 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LINC01560Q8TB33 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LINC01560Q8TB33 ECEL1P3-201ENST00000427961 737 ntBASIC17.72■□□□□ 0.43
LINC01560Q8TB33 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC17.72■□□□□ 0.43
LINC01560Q8TB33 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LINC01560Q8TB33 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC17.72■□□□□ 0.43
LINC01560Q8TB33 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LINC01560Q8TB33 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC17.72■□□□□ 0.43
LINC01560Q8TB33 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LINC01560Q8TB33 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LINC01560Q8TB33 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LINC01560Q8TB33 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
LINC01560Q8TB33 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC17.72■□□□□ 0.43
LINC01560Q8TB33 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
LINC01560Q8TB33 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LINC01560Q8TB33 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
LINC01560Q8TB33 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LINC01560Q8TB33 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LINC01560Q8TB33 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LINC01560Q8TB33 MDFI-202ENST00000373050 809 ntTSL 2 BASIC17.71■□□□□ 0.43
LINC01560Q8TB33 AC239809.2-201ENST00000415381 517 ntBASIC17.71■□□□□ 0.43
LINC01560Q8TB33 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC17.71■□□□□ 0.43
LINC01560Q8TB33 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
LINC01560Q8TB33 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC17.71■□□□□ 0.43
LINC01560Q8TB33 REXO2-216ENST00000544196 452 ntTSL 3 BASIC17.71■□□□□ 0.43
LINC01560Q8TB33 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC17.71■□□□□ 0.43
LINC01560Q8TB33 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC17.71■□□□□ 0.43
LINC01560Q8TB33 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LINC01560Q8TB33 AC124016.1-201ENST00000609552 612 ntBASIC17.71■□□□□ 0.43
LINC01560Q8TB33 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
LINC01560Q8TB33 REXO1L12P-201ENST00000622156 912 ntBASIC17.71■□□□□ 0.43
LINC01560Q8TB33 AC073912.3-201ENST00000624414 853 ntBASIC17.71■□□□□ 0.43
LINC01560Q8TB33 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
LINC01560Q8TB33 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LINC01560Q8TB33 MOK-233ENST00000524214 1539 ntTSL 2 BASIC17.71■□□□□ 0.43
LINC01560Q8TB33 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LINC01560Q8TB33 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
LINC01560Q8TB33 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC17.71■□□□□ 0.42
LINC01560Q8TB33 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC17.71■□□□□ 0.42
LINC01560Q8TB33 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.42
LINC01560Q8TB33 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC17.7■□□□□ 0.42
LINC01560Q8TB33 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LINC01560Q8TB33 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LINC01560Q8TB33 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC17.7■□□□□ 0.42
LINC01560Q8TB33 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LINC01560Q8TB33 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LINC01560Q8TB33 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LINC01560Q8TB33 SERF2-207ENST00000409614 582 ntTSL 2 BASIC17.7■□□□□ 0.42
LINC01560Q8TB33 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC17.7■□□□□ 0.42
LINC01560Q8TB33 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LINC01560Q8TB33 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
LINC01560Q8TB33 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LINC01560Q8TB33 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC17.7■□□□□ 0.42
LINC01560Q8TB33 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC17.7■□□□□ 0.42
LINC01560Q8TB33 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC17.7■□□□□ 0.42
LINC01560Q8TB33 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LINC01560Q8TB33 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
LINC01560Q8TB33 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LINC01560Q8TB33 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
LINC01560Q8TB33 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
LINC01560Q8TB33 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
LINC01560Q8TB33 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LINC01560Q8TB33 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LINC01560Q8TB33 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC17.69■□□□□ 0.42
LINC01560Q8TB33 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
LINC01560Q8TB33 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LINC01560Q8TB33 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
LINC01560Q8TB33 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LINC01560Q8TB33 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms