Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
COL22A1Q8NFW1 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
COL22A1Q8NFW1 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC27.64■■■□□ 2.02
COL22A1Q8NFW1 AC092053.2-201ENST00000640557 1818 ntBASIC27.64■■■□□ 2.02
COL22A1Q8NFW1 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC27.64■■■□□ 2.02
COL22A1Q8NFW1 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
COL22A1Q8NFW1 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC27.64■■■□□ 2.02
COL22A1Q8NFW1 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC27.64■■■□□ 2.02
COL22A1Q8NFW1 AC087388.1-201ENST00000571370 1112 ntBASIC27.64■■■□□ 2.02
COL22A1Q8NFW1 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC27.64■■■□□ 2.02
COL22A1Q8NFW1 METTL23-204ENST00000586752 904 ntTSL 2 BASIC27.64■■■□□ 2.02
COL22A1Q8NFW1 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC27.64■■■□□ 2.02
COL22A1Q8NFW1 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC27.64■■■□□ 2.02
COL22A1Q8NFW1 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC27.64■■■□□ 2.01
COL22A1Q8NFW1 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.01
COL22A1Q8NFW1 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC27.63■■■□□ 2.01
COL22A1Q8NFW1 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC27.63■■■□□ 2.01
COL22A1Q8NFW1 AL137013.1-201ENST00000432946 1228 ntBASIC27.63■■■□□ 2.01
COL22A1Q8NFW1 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC27.63■■■□□ 2.01
COL22A1Q8NFW1 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC27.63■■■□□ 2.01
COL22A1Q8NFW1 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC27.63■■■□□ 2.01
COL22A1Q8NFW1 AL121906.2-201ENST00000621597 723 ntBASIC27.63■■■□□ 2.01
COL22A1Q8NFW1 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
COL22A1Q8NFW1 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC27.63■■■□□ 2.01
COL22A1Q8NFW1 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
COL22A1Q8NFW1 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
COL22A1Q8NFW1 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
COL22A1Q8NFW1 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC27.63■■■□□ 2.01
COL22A1Q8NFW1 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC27.63■■■□□ 2.01
COL22A1Q8NFW1 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC27.63■■■□□ 2.01
COL22A1Q8NFW1 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
COL22A1Q8NFW1 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC27.63■■■□□ 2.01
COL22A1Q8NFW1 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC27.63■■■□□ 2.01
COL22A1Q8NFW1 MYC-208ENST00000641036 567 ntBASIC27.63■■■□□ 2.01
COL22A1Q8NFW1 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC27.63■■■□□ 2.01
COL22A1Q8NFW1 AC010542.4-201ENST00000563151 1910 ntBASIC27.63■■■□□ 2.01
COL22A1Q8NFW1 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC27.63■■■□□ 2.01
COL22A1Q8NFW1 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC27.62■■■□□ 2.01
COL22A1Q8NFW1 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
COL22A1Q8NFW1 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC27.62■■■□□ 2.01
COL22A1Q8NFW1 AC022616.7-201ENST00000525383 220 ntBASIC27.62■■■□□ 2.01
COL22A1Q8NFW1 AC010203.1-204ENST00000548782 407 ntBASIC27.62■■■□□ 2.01
COL22A1Q8NFW1 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC27.62■■■□□ 2.01
COL22A1Q8NFW1 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC27.62■■■□□ 2.01
COL22A1Q8NFW1 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
COL22A1Q8NFW1 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC27.61■■■□□ 2.01
COL22A1Q8NFW1 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC27.61■■■□□ 2.01
COL22A1Q8NFW1 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC27.61■■■□□ 2.01
COL22A1Q8NFW1 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC27.61■■■□□ 2.01
COL22A1Q8NFW1 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC27.61■■■□□ 2.01
COL22A1Q8NFW1 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC27.61■■■□□ 2.01
COL22A1Q8NFW1 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC27.61■■■□□ 2.01
COL22A1Q8NFW1 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC27.61■■■□□ 2.01
COL22A1Q8NFW1 TMA16-209ENST00000513272 803 ntTSL 2 BASIC27.61■■■□□ 2.01
COL22A1Q8NFW1 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC27.61■■■□□ 2.01
COL22A1Q8NFW1 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
COL22A1Q8NFW1 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC27.61■■■□□ 2.01
COL22A1Q8NFW1 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC27.61■■■□□ 2.01
COL22A1Q8NFW1 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC27.61■■■□□ 2.01
COL22A1Q8NFW1 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC27.61■■■□□ 2.01
COL22A1Q8NFW1 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC27.61■■■□□ 2.01
COL22A1Q8NFW1 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC27.61■■■□□ 2.01
COL22A1Q8NFW1 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC27.61■■■□□ 2.01
COL22A1Q8NFW1 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC27.6■■■□□ 2.01
COL22A1Q8NFW1 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC27.6■■■□□ 2.01
COL22A1Q8NFW1 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC27.6■■■□□ 2.01
COL22A1Q8NFW1 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
COL22A1Q8NFW1 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC27.6■■■□□ 2.01
COL22A1Q8NFW1 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
COL22A1Q8NFW1 NMU-205ENST00000511469 756 ntTSL 3 BASIC27.6■■■□□ 2.01
COL22A1Q8NFW1 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC27.6■■■□□ 2.01
COL22A1Q8NFW1 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC27.6■■■□□ 2.01
COL22A1Q8NFW1 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC27.6■■■□□ 2.01
COL22A1Q8NFW1 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC27.6■■■□□ 2.01
COL22A1Q8NFW1 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC27.6■■■□□ 2.01
COL22A1Q8NFW1 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC27.6■■■□□ 2.01
COL22A1Q8NFW1 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC27.6■■■□□ 2.01
COL22A1Q8NFW1 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC27.6■■■□□ 2.01
COL22A1Q8NFW1 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC27.6■■■□□ 2.01
COL22A1Q8NFW1 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC27.6■■■□□ 2.01
COL22A1Q8NFW1 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC27.59■■■□□ 2.01
COL22A1Q8NFW1 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC27.59■■■□□ 2.01
COL22A1Q8NFW1 TOLLIP-AS1-201ENST00000530897 939 ntBASIC27.59■■■□□ 2.01
COL22A1Q8NFW1 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC27.59■■■□□ 2.01
COL22A1Q8NFW1 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC27.59■■■□□ 2.01
COL22A1Q8NFW1 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC27.59■■■□□ 2.01
COL22A1Q8NFW1 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC27.59■■■□□ 2.01
COL22A1Q8NFW1 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC27.59■■■□□ 2.01
COL22A1Q8NFW1 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC27.59■■■□□ 2.01
COL22A1Q8NFW1 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC27.59■■■□□ 2.01
COL22A1Q8NFW1 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC27.59■■■□□ 2.01
COL22A1Q8NFW1 NIFKP9-201ENST00000419265 221 ntBASIC27.59■■■□□ 2.01
COL22A1Q8NFW1 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC27.59■■■□□ 2.01
COL22A1Q8NFW1 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC27.59■■■□□ 2.01
COL22A1Q8NFW1 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC27.59■■■□□ 2.01
COL22A1Q8NFW1 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC27.59■■■□□ 2.01
COL22A1Q8NFW1 AL121894.2-201ENST00000602977 491 ntBASIC27.59■■■□□ 2.01
COL22A1Q8NFW1 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC27.59■■■□□ 2.01
COL22A1Q8NFW1 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC27.59■■■□□ 2.01
COL22A1Q8NFW1 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC27.59■■■□□ 2.01
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms