Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
SPTSSBQ8NFR3 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
SPTSSBQ8NFR3 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SPTSSBQ8NFR3 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
SPTSSBQ8NFR3 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
SPTSSBQ8NFR3 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC11.22□□□□□ -0.61
SPTSSBQ8NFR3 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC11.22□□□□□ -0.61
SPTSSBQ8NFR3 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
SPTSSBQ8NFR3 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC11.22□□□□□ -0.61
SPTSSBQ8NFR3 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC11.22□□□□□ -0.61
SPTSSBQ8NFR3 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
SPTSSBQ8NFR3 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
SPTSSBQ8NFR3 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC11.22□□□□□ -0.61
SPTSSBQ8NFR3 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC11.22□□□□□ -0.61
SPTSSBQ8NFR3 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
SPTSSBQ8NFR3 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
SPTSSBQ8NFR3 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SPTSSBQ8NFR3 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SPTSSBQ8NFR3 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
SPTSSBQ8NFR3 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SPTSSBQ8NFR3 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SPTSSBQ8NFR3 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
SPTSSBQ8NFR3 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
SPTSSBQ8NFR3 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
SPTSSBQ8NFR3 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
SPTSSBQ8NFR3 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
SPTSSBQ8NFR3 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
SPTSSBQ8NFR3 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
SPTSSBQ8NFR3 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SPTSSBQ8NFR3 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
SPTSSBQ8NFR3 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
SPTSSBQ8NFR3 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
SPTSSBQ8NFR3 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
SPTSSBQ8NFR3 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
SPTSSBQ8NFR3 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC11.21□□□□□ -0.61
SPTSSBQ8NFR3 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
SPTSSBQ8NFR3 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
SPTSSBQ8NFR3 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
SPTSSBQ8NFR3 BX323043.1-201ENST00000641006 1765 ntBASIC11.21□□□□□ -0.61
SPTSSBQ8NFR3 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
SPTSSBQ8NFR3 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
SPTSSBQ8NFR3 MIR219A2-201ENST00000608502 1504 ntBASIC11.21□□□□□ -0.61
SPTSSBQ8NFR3 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
SPTSSBQ8NFR3 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
SPTSSBQ8NFR3 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
SPTSSBQ8NFR3 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
SPTSSBQ8NFR3 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
SPTSSBQ8NFR3 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
SPTSSBQ8NFR3 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
SPTSSBQ8NFR3 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
SPTSSBQ8NFR3 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
SPTSSBQ8NFR3 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
SPTSSBQ8NFR3 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC11.21□□□□□ -0.62
SPTSSBQ8NFR3 PCDHAC2-203ENST00000615316 3011 ntBASIC11.21□□□□□ -0.62
SPTSSBQ8NFR3 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC11.21□□□□□ -0.62
SPTSSBQ8NFR3 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC11.21□□□□□ -0.62
SPTSSBQ8NFR3 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
SPTSSBQ8NFR3 SBF1P1-201ENST00000444527 5631 ntBASIC11.21□□□□□ -0.62
SPTSSBQ8NFR3 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
SPTSSBQ8NFR3 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC11.21□□□□□ -0.62
SPTSSBQ8NFR3 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
SPTSSBQ8NFR3 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
SPTSSBQ8NFR3 AFG3L1P-217ENST00000557444 2447 ntBASIC11.2□□□□□ -0.62
SPTSSBQ8NFR3 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
SPTSSBQ8NFR3 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC11.2□□□□□ -0.62
SPTSSBQ8NFR3 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
SPTSSBQ8NFR3 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
SPTSSBQ8NFR3 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
SPTSSBQ8NFR3 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
SPTSSBQ8NFR3 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
SPTSSBQ8NFR3 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC11.2□□□□□ -0.62
SPTSSBQ8NFR3 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
SPTSSBQ8NFR3 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
SPTSSBQ8NFR3 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
SPTSSBQ8NFR3 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
SPTSSBQ8NFR3 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
SPTSSBQ8NFR3 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
SPTSSBQ8NFR3 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
SPTSSBQ8NFR3 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC11.2□□□□□ -0.62
SPTSSBQ8NFR3 AC148477.6-201ENST00000623746 465 ntBASIC11.2□□□□□ -0.62
SPTSSBQ8NFR3 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
SPTSSBQ8NFR3 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
SPTSSBQ8NFR3 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC11.2□□□□□ -0.62
SPTSSBQ8NFR3 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
SPTSSBQ8NFR3 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC11.2□□□□□ -0.62
SPTSSBQ8NFR3 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
SPTSSBQ8NFR3 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
SPTSSBQ8NFR3 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
SPTSSBQ8NFR3 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC11.2□□□□□ -0.62
SPTSSBQ8NFR3 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
SPTSSBQ8NFR3 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
SPTSSBQ8NFR3 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC11.2□□□□□ -0.62
SPTSSBQ8NFR3 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
SPTSSBQ8NFR3 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
SPTSSBQ8NFR3 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
SPTSSBQ8NFR3 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
SPTSSBQ8NFR3 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
SPTSSBQ8NFR3 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
SPTSSBQ8NFR3 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
SPTSSBQ8NFR3 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms