Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
NUP43Q8NFH3 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
NUP43Q8NFH3 AC092720.2-201ENST00000602388 1665 ntBASIC19.11■□□□□ 0.65
NUP43Q8NFH3 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NUP43Q8NFH3 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
NUP43Q8NFH3 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.1■□□□□ 0.65
NUP43Q8NFH3 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NUP43Q8NFH3 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NUP43Q8NFH3 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
NUP43Q8NFH3 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
NUP43Q8NFH3 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
NUP43Q8NFH3 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC19.1■□□□□ 0.65
NUP43Q8NFH3 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC19.1■□□□□ 0.65
NUP43Q8NFH3 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC19.1■□□□□ 0.65
NUP43Q8NFH3 MFSD11-216ENST00000590393 1141 ntBASIC19.1■□□□□ 0.65
NUP43Q8NFH3 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NUP43Q8NFH3 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
NUP43Q8NFH3 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NUP43Q8NFH3 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NUP43Q8NFH3 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
NUP43Q8NFH3 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.09■□□□□ 0.65
NUP43Q8NFH3 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
NUP43Q8NFH3 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
NUP43Q8NFH3 AC006015.1-201ENST00000429970 570 ntBASIC19.09■□□□□ 0.65
NUP43Q8NFH3 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
NUP43Q8NFH3 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC19.09■□□□□ 0.65
NUP43Q8NFH3 AC013268.1-206ENST00000638368 961 ntBASIC19.09■□□□□ 0.65
NUP43Q8NFH3 AC112229.1-201ENST00000639295 961 ntBASIC19.09■□□□□ 0.65
NUP43Q8NFH3 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.09■□□□□ 0.65
NUP43Q8NFH3 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.09■□□□□ 0.65
NUP43Q8NFH3 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NUP43Q8NFH3 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NUP43Q8NFH3 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NUP43Q8NFH3 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC19.09■□□□□ 0.65
NUP43Q8NFH3 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC19.09■□□□□ 0.65
NUP43Q8NFH3 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.09■□□□□ 0.65
NUP43Q8NFH3 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC19.08■□□□□ 0.65
NUP43Q8NFH3 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.08■□□□□ 0.65
NUP43Q8NFH3 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
NUP43Q8NFH3 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
NUP43Q8NFH3 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.08■□□□□ 0.65
NUP43Q8NFH3 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
NUP43Q8NFH3 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19.08■□□□□ 0.65
NUP43Q8NFH3 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
NUP43Q8NFH3 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
NUP43Q8NFH3 ME3-201ENST00000323418 1068 ntTSL 5 BASIC19.08■□□□□ 0.64
NUP43Q8NFH3 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC19.08■□□□□ 0.64
NUP43Q8NFH3 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC19.08■□□□□ 0.64
NUP43Q8NFH3 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
NUP43Q8NFH3 AC007322.4-201ENST00000509611 723 ntBASIC19.08■□□□□ 0.64
NUP43Q8NFH3 FAM21FP-204ENST00000608637 956 ntBASIC19.08■□□□□ 0.64
NUP43Q8NFH3 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
NUP43Q8NFH3 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
NUP43Q8NFH3 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.08■□□□□ 0.64
NUP43Q8NFH3 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
NUP43Q8NFH3 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC19.08■□□□□ 0.64
NUP43Q8NFH3 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NUP43Q8NFH3 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
NUP43Q8NFH3 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
NUP43Q8NFH3 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NUP43Q8NFH3 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
NUP43Q8NFH3 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC19.07■□□□□ 0.64
NUP43Q8NFH3 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC19.07■□□□□ 0.64
NUP43Q8NFH3 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NUP43Q8NFH3 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC19.07■□□□□ 0.64
NUP43Q8NFH3 VMO1-204ENST00000441199 741 ntTSL 2 BASIC19.07■□□□□ 0.64
NUP43Q8NFH3 CASP6-205ENST00000505486 538 ntTSL 4 BASIC19.07■□□□□ 0.64
NUP43Q8NFH3 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC19.07■□□□□ 0.64
NUP43Q8NFH3 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC19.07■□□□□ 0.64
NUP43Q8NFH3 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19.07■□□□□ 0.64
NUP43Q8NFH3 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
NUP43Q8NFH3 AC011767.1-201ENST00000617410 1153 ntBASIC19.07■□□□□ 0.64
NUP43Q8NFH3 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
NUP43Q8NFH3 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
NUP43Q8NFH3 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC19.07■□□□□ 0.64
NUP43Q8NFH3 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NUP43Q8NFH3 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NUP43Q8NFH3 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
NUP43Q8NFH3 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
NUP43Q8NFH3 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.06■□□□□ 0.64
NUP43Q8NFH3 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
NUP43Q8NFH3 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NUP43Q8NFH3 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC19.06■□□□□ 0.64
NUP43Q8NFH3 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NUP43Q8NFH3 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
NUP43Q8NFH3 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
NUP43Q8NFH3 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NUP43Q8NFH3 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NUP43Q8NFH3 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
NUP43Q8NFH3 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
NUP43Q8NFH3 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NUP43Q8NFH3 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
NUP43Q8NFH3 DUX4L16-201ENST00000555130 1264 ntBASIC19.06■□□□□ 0.64
NUP43Q8NFH3 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC19.06■□□□□ 0.64
NUP43Q8NFH3 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
NUP43Q8NFH3 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
NUP43Q8NFH3 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
NUP43Q8NFH3 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
NUP43Q8NFH3 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NUP43Q8NFH3 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms