Protein–RNA interactions for Protein: Q8N684

CPSF7, Cleavage and polyadenylation specificity factor subunit 7, humanhuman

Known RBP Predictions only

Length 471 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7Q8N684 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CPSF7Q8N684 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CPSF7Q8N684 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.92■□□□□ 0.78
CPSF7Q8N684 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC19.92■□□□□ 0.78
CPSF7Q8N684 GXYLT1P2-201ENST00000433312 1230 ntBASIC19.92■□□□□ 0.78
CPSF7Q8N684 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
CPSF7Q8N684 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC19.92■□□□□ 0.78
CPSF7Q8N684 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.92■□□□□ 0.78
CPSF7Q8N684 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CPSF7Q8N684 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CPSF7Q8N684 SMG8-203ENST00000578922 2178 ntBASIC19.92■□□□□ 0.78
CPSF7Q8N684 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CPSF7Q8N684 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CPSF7Q8N684 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CPSF7Q8N684 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CPSF7Q8N684 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC19.92■□□□□ 0.78
CPSF7Q8N684 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
CPSF7Q8N684 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC19.92■□□□□ 0.78
CPSF7Q8N684 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CPSF7Q8N684 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.92■□□□□ 0.78
CPSF7Q8N684 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CPSF7Q8N684 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
CPSF7Q8N684 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CPSF7Q8N684 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CPSF7Q8N684 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CPSF7Q8N684 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CPSF7Q8N684 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC19.91■□□□□ 0.78
CPSF7Q8N684 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
CPSF7Q8N684 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC19.91■□□□□ 0.78
CPSF7Q8N684 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CPSF7Q8N684 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CPSF7Q8N684 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC19.91■□□□□ 0.78
CPSF7Q8N684 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC19.91■□□□□ 0.78
CPSF7Q8N684 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC19.91■□□□□ 0.78
CPSF7Q8N684 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
CPSF7Q8N684 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
CPSF7Q8N684 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
CPSF7Q8N684 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CPSF7Q8N684 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.91■□□□□ 0.78
CPSF7Q8N684 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.91■□□□□ 0.78
CPSF7Q8N684 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC19.9■□□□□ 0.78
CPSF7Q8N684 TCF3P1-201ENST00000423021 1937 ntBASIC19.9■□□□□ 0.78
CPSF7Q8N684 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
CPSF7Q8N684 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CPSF7Q8N684 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CPSF7Q8N684 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
CPSF7Q8N684 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC19.9■□□□□ 0.78
CPSF7Q8N684 AL137784.2-201ENST00000607332 1000 ntBASIC19.9■□□□□ 0.78
CPSF7Q8N684 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CPSF7Q8N684 AC092437.1-201ENST00000624794 1048 ntBASIC19.9■□□□□ 0.78
CPSF7Q8N684 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
CPSF7Q8N684 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CPSF7Q8N684 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CPSF7Q8N684 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
CPSF7Q8N684 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CPSF7Q8N684 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.9■□□□□ 0.78
CPSF7Q8N684 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC19.9■□□□□ 0.78
CPSF7Q8N684 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
CPSF7Q8N684 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CPSF7Q8N684 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CPSF7Q8N684 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.78
CPSF7Q8N684 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CPSF7Q8N684 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CPSF7Q8N684 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CPSF7Q8N684 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CPSF7Q8N684 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CPSF7Q8N684 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
CPSF7Q8N684 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CPSF7Q8N684 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
CPSF7Q8N684 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC19.89■□□□□ 0.77
CPSF7Q8N684 RNF146-206ENST00000480444 843 ntTSL 2 BASIC19.89■□□□□ 0.77
CPSF7Q8N684 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.89■□□□□ 0.77
CPSF7Q8N684 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC19.89■□□□□ 0.77
CPSF7Q8N684 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.89■□□□□ 0.77
CPSF7Q8N684 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.89■□□□□ 0.77
CPSF7Q8N684 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC19.89■□□□□ 0.77
CPSF7Q8N684 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CPSF7Q8N684 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC19.89■□□□□ 0.77
CPSF7Q8N684 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
CPSF7Q8N684 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CPSF7Q8N684 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.88■□□□□ 0.77
CPSF7Q8N684 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CPSF7Q8N684 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
CPSF7Q8N684 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
CPSF7Q8N684 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19.88■□□□□ 0.77
CPSF7Q8N684 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.88■□□□□ 0.77
CPSF7Q8N684 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CPSF7Q8N684 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
CPSF7Q8N684 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CPSF7Q8N684 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CPSF7Q8N684 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CPSF7Q8N684 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CPSF7Q8N684 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC19.88■□□□□ 0.77
CPSF7Q8N684 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC19.88■□□□□ 0.77
CPSF7Q8N684 TPRG1LP1-201ENST00000598702 760 ntBASIC19.88■□□□□ 0.77
CPSF7Q8N684 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
CPSF7Q8N684 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.88■□□□□ 0.77
CPSF7Q8N684 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
CPSF7Q8N684 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CPSF7Q8N684 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms