Protein–RNA interactions for Protein: Q8N1W1

ARHGEF28, Rho guanine nucleotide exchange factor 28, humanhuman

Known RBP Predictions only

Length 1,705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28Q8N1W1 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
ARHGEF28Q8N1W1 AC011484.1-201ENST00000377652 1995 ntBASIC28.52■■■□□ 2.16
ARHGEF28Q8N1W1 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
ARHGEF28Q8N1W1 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC28.52■■■□□ 2.16
ARHGEF28Q8N1W1 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC28.52■■■□□ 2.16
ARHGEF28Q8N1W1 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC28.52■■■□□ 2.16
ARHGEF28Q8N1W1 AL024507.2-201ENST00000606070 2574 ntBASIC28.52■■■□□ 2.16
ARHGEF28Q8N1W1 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC28.52■■■□□ 2.16
ARHGEF28Q8N1W1 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC28.52■■■□□ 2.16
ARHGEF28Q8N1W1 ARL16-209ENST00000573715 763 ntTSL 3 BASIC28.52■■■□□ 2.16
ARHGEF28Q8N1W1 ARL16-211ENST00000576135 694 ntTSL 3 BASIC28.52■■■□□ 2.16
ARHGEF28Q8N1W1 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC28.51■■■□□ 2.16
ARHGEF28Q8N1W1 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC28.51■■■□□ 2.15
ARHGEF28Q8N1W1 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC28.51■■■□□ 2.15
ARHGEF28Q8N1W1 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
ARHGEF28Q8N1W1 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
ARHGEF28Q8N1W1 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC28.51■■■□□ 2.15
ARHGEF28Q8N1W1 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC28.51■■■□□ 2.15
ARHGEF28Q8N1W1 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
ARHGEF28Q8N1W1 SPIB-206ENST00000596074 847 ntTSL 2 BASIC28.51■■■□□ 2.15
ARHGEF28Q8N1W1 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
ARHGEF28Q8N1W1 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC28.51■■■□□ 2.15
ARHGEF28Q8N1W1 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
ARHGEF28Q8N1W1 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
ARHGEF28Q8N1W1 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
ARHGEF28Q8N1W1 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC28.5■■■□□ 2.15
ARHGEF28Q8N1W1 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
ARHGEF28Q8N1W1 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
ARHGEF28Q8N1W1 MIR718-201ENST00000390190 70 ntBASIC28.5■■■□□ 2.15
ARHGEF28Q8N1W1 ABHD17AP6-201ENST00000458502 1044 ntBASIC28.5■■■□□ 2.15
ARHGEF28Q8N1W1 SNORA78-201ENST00000459373 127 ntBASIC28.5■■■□□ 2.15
ARHGEF28Q8N1W1 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC28.5■■■□□ 2.15
ARHGEF28Q8N1W1 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC28.5■■■□□ 2.15
ARHGEF28Q8N1W1 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC28.5■■■□□ 2.15
ARHGEF28Q8N1W1 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC28.5■■■□□ 2.15
ARHGEF28Q8N1W1 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
ARHGEF28Q8N1W1 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
ARHGEF28Q8N1W1 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
ARHGEF28Q8N1W1 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC28.49■■■□□ 2.15
ARHGEF28Q8N1W1 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
ARHGEF28Q8N1W1 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC28.49■■■□□ 2.15
ARHGEF28Q8N1W1 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC28.49■■■□□ 2.15
ARHGEF28Q8N1W1 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
ARHGEF28Q8N1W1 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
ARHGEF28Q8N1W1 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
ARHGEF28Q8N1W1 KRT8P36-201ENST00000489121 1440 ntBASIC28.49■■■□□ 2.15
ARHGEF28Q8N1W1 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
ARHGEF28Q8N1W1 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC28.49■■■□□ 2.15
ARHGEF28Q8N1W1 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC28.49■■■□□ 2.15
ARHGEF28Q8N1W1 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC28.49■■■□□ 2.15
ARHGEF28Q8N1W1 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC28.49■■■□□ 2.15
ARHGEF28Q8N1W1 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
ARHGEF28Q8N1W1 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC28.48■■■□□ 2.15
ARHGEF28Q8N1W1 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
ARHGEF28Q8N1W1 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC28.48■■■□□ 2.15
ARHGEF28Q8N1W1 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC28.48■■■□□ 2.15
ARHGEF28Q8N1W1 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC28.48■■■□□ 2.15
ARHGEF28Q8N1W1 PTBP1P-201ENST00000554374 1601 ntBASIC28.48■■■□□ 2.15
ARHGEF28Q8N1W1 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
ARHGEF28Q8N1W1 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
ARHGEF28Q8N1W1 KRASP1-201ENST00000407852 552 ntBASIC28.48■■■□□ 2.15
ARHGEF28Q8N1W1 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
ARHGEF28Q8N1W1 Z99916.2-201ENST00000604037 246 ntBASIC28.48■■■□□ 2.15
ARHGEF28Q8N1W1 AC006557.6-201ENST00000623071 864 ntBASIC28.48■■■□□ 2.15
ARHGEF28Q8N1W1 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC28.48■■■□□ 2.15
ARHGEF28Q8N1W1 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
ARHGEF28Q8N1W1 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC28.48■■■□□ 2.15
ARHGEF28Q8N1W1 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
ARHGEF28Q8N1W1 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
ARHGEF28Q8N1W1 AC027702.1-201ENST00000563810 1770 ntBASIC28.47■■■□□ 2.15
ARHGEF28Q8N1W1 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC28.47■■■□□ 2.15
ARHGEF28Q8N1W1 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC28.47■■■□□ 2.15
ARHGEF28Q8N1W1 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
ARHGEF28Q8N1W1 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
ARHGEF28Q8N1W1 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC28.47■■■□□ 2.15
ARHGEF28Q8N1W1 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC28.47■■■□□ 2.15
ARHGEF28Q8N1W1 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC28.47■■■□□ 2.15
ARHGEF28Q8N1W1 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC28.47■■■□□ 2.15
ARHGEF28Q8N1W1 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
ARHGEF28Q8N1W1 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC28.47■■■□□ 2.15
ARHGEF28Q8N1W1 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
ARHGEF28Q8N1W1 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC28.46■■■□□ 2.15
ARHGEF28Q8N1W1 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
ARHGEF28Q8N1W1 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC28.46■■■□□ 2.15
ARHGEF28Q8N1W1 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC28.46■■■□□ 2.15
ARHGEF28Q8N1W1 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC28.46■■■□□ 2.15
ARHGEF28Q8N1W1 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC28.46■■■□□ 2.15
ARHGEF28Q8N1W1 Six3os1_6.1-201ENST00000620790 196 ntBASIC28.46■■■□□ 2.15
ARHGEF28Q8N1W1 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC28.46■■■□□ 2.15
ARHGEF28Q8N1W1 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
ARHGEF28Q8N1W1 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
ARHGEF28Q8N1W1 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC28.46■■■□□ 2.15
ARHGEF28Q8N1W1 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
ARHGEF28Q8N1W1 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
ARHGEF28Q8N1W1 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC28.46■■■□□ 2.15
ARHGEF28Q8N1W1 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC28.46■■■□□ 2.15
ARHGEF28Q8N1W1 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC28.46■■■□□ 2.15
ARHGEF28Q8N1W1 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
ARHGEF28Q8N1W1 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC28.46■■■□□ 2.15
ARHGEF28Q8N1W1 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms