Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC01561Q8N1V8 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LINC01561Q8N1V8 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LINC01561Q8N1V8 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LINC01561Q8N1V8 KRT87P-202ENST00000534226 1464 ntBASIC13.68□□□□□ -0.22
LINC01561Q8N1V8 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC13.68□□□□□ -0.22
LINC01561Q8N1V8 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LINC01561Q8N1V8 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC13.68□□□□□ -0.22
LINC01561Q8N1V8 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
LINC01561Q8N1V8 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LINC01561Q8N1V8 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC13.68□□□□□ -0.22
LINC01561Q8N1V8 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
LINC01561Q8N1V8 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LINC01561Q8N1V8 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC13.68□□□□□ -0.22
LINC01561Q8N1V8 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC13.68□□□□□ -0.22
LINC01561Q8N1V8 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
LINC01561Q8N1V8 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
LINC01561Q8N1V8 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC13.68□□□□□ -0.22
LINC01561Q8N1V8 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC13.68□□□□□ -0.22
LINC01561Q8N1V8 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC13.68□□□□□ -0.22
LINC01561Q8N1V8 TPRG1LP1-201ENST00000598702 760 ntBASIC13.68□□□□□ -0.22
LINC01561Q8N1V8 AL358852.1-201ENST00000623174 1268 ntBASIC13.68□□□□□ -0.22
LINC01561Q8N1V8 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
LINC01561Q8N1V8 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LINC01561Q8N1V8 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC13.68□□□□□ -0.22
LINC01561Q8N1V8 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LINC01561Q8N1V8 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC13.68□□□□□ -0.22
LINC01561Q8N1V8 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LINC01561Q8N1V8 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
LINC01561Q8N1V8 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LINC01561Q8N1V8 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
LINC01561Q8N1V8 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
LINC01561Q8N1V8 BX323043.1-201ENST00000641006 1765 ntBASIC13.68□□□□□ -0.22
LINC01561Q8N1V8 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LINC01561Q8N1V8 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
LINC01561Q8N1V8 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
LINC01561Q8N1V8 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC13.68□□□□□ -0.22
LINC01561Q8N1V8 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LINC01561Q8N1V8 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
LINC01561Q8N1V8 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC01561Q8N1V8 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC01561Q8N1V8 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC01561Q8N1V8 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC13.67□□□□□ -0.22
LINC01561Q8N1V8 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC13.67□□□□□ -0.22
LINC01561Q8N1V8 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC13.67□□□□□ -0.22
LINC01561Q8N1V8 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC01561Q8N1V8 EBPL-204ENST00000378272 766 ntTSL 3 BASIC13.67□□□□□ -0.22
LINC01561Q8N1V8 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC01561Q8N1V8 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LINC01561Q8N1V8 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LINC01561Q8N1V8 GRAMD4P4-201ENST00000613563 1115 ntBASIC13.67□□□□□ -0.22
LINC01561Q8N1V8 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LINC01561Q8N1V8 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC13.67□□□□□ -0.22
LINC01561Q8N1V8 AL158211.5-201ENST00000623583 2518 ntBASIC13.67□□□□□ -0.22
LINC01561Q8N1V8 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC01561Q8N1V8 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC01561Q8N1V8 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
LINC01561Q8N1V8 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC01561Q8N1V8 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC01561Q8N1V8 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC13.67□□□□□ -0.22
LINC01561Q8N1V8 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC01561Q8N1V8 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC01561Q8N1V8 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC13.67□□□□□ -0.22
LINC01561Q8N1V8 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC13.66□□□□□ -0.22
LINC01561Q8N1V8 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC01561Q8N1V8 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC01561Q8N1V8 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LINC01561Q8N1V8 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LINC01561Q8N1V8 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LINC01561Q8N1V8 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC01561Q8N1V8 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC13.66□□□□□ -0.22
LINC01561Q8N1V8 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LINC01561Q8N1V8 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
LINC01561Q8N1V8 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC13.66□□□□□ -0.22
LINC01561Q8N1V8 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
LINC01561Q8N1V8 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC01561Q8N1V8 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC01561Q8N1V8 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
LINC01561Q8N1V8 AC091305.1-201ENST00000479476 895 ntBASIC13.66□□□□□ -0.22
LINC01561Q8N1V8 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC13.66□□□□□ -0.22
LINC01561Q8N1V8 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC13.66□□□□□ -0.22
LINC01561Q8N1V8 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC13.66□□□□□ -0.22
LINC01561Q8N1V8 AL355001.2-201ENST00000620617 1191 ntBASIC13.66□□□□□ -0.22
LINC01561Q8N1V8 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC01561Q8N1V8 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC01561Q8N1V8 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC01561Q8N1V8 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LINC01561Q8N1V8 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC01561Q8N1V8 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC01561Q8N1V8 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC13.66□□□□□ -0.22
LINC01561Q8N1V8 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC01561Q8N1V8 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC13.66□□□□□ -0.22
LINC01561Q8N1V8 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC01561Q8N1V8 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC01561Q8N1V8 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC01561Q8N1V8 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC01561Q8N1V8 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC01561Q8N1V8 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC01561Q8N1V8 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC13.65□□□□□ -0.22
LINC01561Q8N1V8 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms