Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC20.37■□□□□ 0.85
TMEFF1Q8IYR6 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
TMEFF1Q8IYR6 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TMEFF1Q8IYR6 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TMEFF1Q8IYR6 AC242852.2-201ENST00000615738 1807 ntBASIC20.37■□□□□ 0.85
TMEFF1Q8IYR6 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
TMEFF1Q8IYR6 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TMEFF1Q8IYR6 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TMEFF1Q8IYR6 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TMEFF1Q8IYR6 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TMEFF1Q8IYR6 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC20.36■□□□□ 0.85
TMEFF1Q8IYR6 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TMEFF1Q8IYR6 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TMEFF1Q8IYR6 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TMEFF1Q8IYR6 TSPY15P-201ENST00000457163 923 ntBASIC20.36■□□□□ 0.85
TMEFF1Q8IYR6 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
TMEFF1Q8IYR6 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TMEFF1Q8IYR6 BRWD1-AS2-201ENST00000603064 1028 ntBASIC20.36■□□□□ 0.85
TMEFF1Q8IYR6 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
TMEFF1Q8IYR6 AC133561.5-201ENST00000635547 218 ntBASIC20.36■□□□□ 0.85
TMEFF1Q8IYR6 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TMEFF1Q8IYR6 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC20.36■□□□□ 0.85
TMEFF1Q8IYR6 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TMEFF1Q8IYR6 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
TMEFF1Q8IYR6 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.35■□□□□ 0.85
TMEFF1Q8IYR6 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
TMEFF1Q8IYR6 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TMEFF1Q8IYR6 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TMEFF1Q8IYR6 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC20.35■□□□□ 0.85
TMEFF1Q8IYR6 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20.35■□□□□ 0.85
TMEFF1Q8IYR6 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TMEFF1Q8IYR6 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC20.35■□□□□ 0.85
TMEFF1Q8IYR6 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TMEFF1Q8IYR6 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
TMEFF1Q8IYR6 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC20.35■□□□□ 0.85
TMEFF1Q8IYR6 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
TMEFF1Q8IYR6 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
TMEFF1Q8IYR6 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TMEFF1Q8IYR6 DHDH-203ENST00000522614 776 ntTSL 5 BASIC20.35■□□□□ 0.85
TMEFF1Q8IYR6 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC20.35■□□□□ 0.85
TMEFF1Q8IYR6 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC20.35■□□□□ 0.85
TMEFF1Q8IYR6 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.35■□□□□ 0.85
TMEFF1Q8IYR6 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TMEFF1Q8IYR6 AL117328.2-201ENST00000624617 1940 ntBASIC20.35■□□□□ 0.85
TMEFF1Q8IYR6 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TMEFF1Q8IYR6 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TMEFF1Q8IYR6 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
TMEFF1Q8IYR6 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.34■□□□□ 0.85
TMEFF1Q8IYR6 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TMEFF1Q8IYR6 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
TMEFF1Q8IYR6 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC20.34■□□□□ 0.85
TMEFF1Q8IYR6 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TMEFF1Q8IYR6 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
TMEFF1Q8IYR6 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TMEFF1Q8IYR6 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TMEFF1Q8IYR6 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TMEFF1Q8IYR6 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC20.34■□□□□ 0.85
TMEFF1Q8IYR6 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TMEFF1Q8IYR6 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC20.34■□□□□ 0.85
TMEFF1Q8IYR6 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC20.34■□□□□ 0.85
TMEFF1Q8IYR6 MAX-217ENST00000557277 728 ntTSL 3 BASIC20.34■□□□□ 0.85
TMEFF1Q8IYR6 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC20.34■□□□□ 0.85
TMEFF1Q8IYR6 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
TMEFF1Q8IYR6 AL135905.2-201ENST00000584934 1404 ntBASIC20.34■□□□□ 0.85
TMEFF1Q8IYR6 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TMEFF1Q8IYR6 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
TMEFF1Q8IYR6 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
TMEFF1Q8IYR6 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
TMEFF1Q8IYR6 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
TMEFF1Q8IYR6 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.33■□□□□ 0.85
TMEFF1Q8IYR6 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
TMEFF1Q8IYR6 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TMEFF1Q8IYR6 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TMEFF1Q8IYR6 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
TMEFF1Q8IYR6 AL390719.1-204ENST00000412397 1219 ntBASIC20.33■□□□□ 0.85
TMEFF1Q8IYR6 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC20.33■□□□□ 0.85
TMEFF1Q8IYR6 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC20.33■□□□□ 0.85
TMEFF1Q8IYR6 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC20.33■□□□□ 0.85
TMEFF1Q8IYR6 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC20.33■□□□□ 0.85
TMEFF1Q8IYR6 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC20.33■□□□□ 0.85
TMEFF1Q8IYR6 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC20.33■□□□□ 0.85
TMEFF1Q8IYR6 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC20.33■□□□□ 0.85
TMEFF1Q8IYR6 MIR4785-201ENST00000585005 73 ntBASIC20.33■□□□□ 0.85
TMEFF1Q8IYR6 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC20.33■□□□□ 0.85
TMEFF1Q8IYR6 AC113410.3-201ENST00000623366 203 ntBASIC20.33■□□□□ 0.85
TMEFF1Q8IYR6 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
TMEFF1Q8IYR6 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
TMEFF1Q8IYR6 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.33■□□□□ 0.84
TMEFF1Q8IYR6 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.33■□□□□ 0.84
TMEFF1Q8IYR6 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TMEFF1Q8IYR6 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TMEFF1Q8IYR6 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TMEFF1Q8IYR6 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TMEFF1Q8IYR6 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TMEFF1Q8IYR6 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TMEFF1Q8IYR6 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.32■□□□□ 0.84
TMEFF1Q8IYR6 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TMEFF1Q8IYR6 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.32■□□□□ 0.84
TMEFF1Q8IYR6 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.32■□□□□ 0.84
TMEFF1Q8IYR6 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms