Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SCN4BQ8IWT1 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SCN4BQ8IWT1 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SCN4BQ8IWT1 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SCN4BQ8IWT1 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SCN4BQ8IWT1 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SCN4BQ8IWT1 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SCN4BQ8IWT1 GAS7-202ENST00000396115 929 ntTSL 5 BASIC21.57■■□□□ 1.04
SCN4BQ8IWT1 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC21.57■■□□□ 1.04
SCN4BQ8IWT1 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC21.57■■□□□ 1.04
SCN4BQ8IWT1 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SCN4BQ8IWT1 AL356652.1-201ENST00000615962 565 ntBASIC21.57■■□□□ 1.04
SCN4BQ8IWT1 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC21.57■■□□□ 1.04
SCN4BQ8IWT1 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC21.57■■□□□ 1.04
SCN4BQ8IWT1 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SCN4BQ8IWT1 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC21.57■■□□□ 1.04
SCN4BQ8IWT1 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SCN4BQ8IWT1 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SCN4BQ8IWT1 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SCN4BQ8IWT1 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SCN4BQ8IWT1 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SCN4BQ8IWT1 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SCN4BQ8IWT1 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SCN4BQ8IWT1 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC21.57■■□□□ 1.04
SCN4BQ8IWT1 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SCN4BQ8IWT1 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SCN4BQ8IWT1 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
SCN4BQ8IWT1 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SCN4BQ8IWT1 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
SCN4BQ8IWT1 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC21.56■■□□□ 1.04
SCN4BQ8IWT1 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC21.56■■□□□ 1.04
SCN4BQ8IWT1 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC21.56■■□□□ 1.04
SCN4BQ8IWT1 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC21.56■■□□□ 1.04
SCN4BQ8IWT1 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SCN4BQ8IWT1 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC21.56■■□□□ 1.04
SCN4BQ8IWT1 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
SCN4BQ8IWT1 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC21.56■■□□□ 1.04
SCN4BQ8IWT1 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC21.56■■□□□ 1.04
SCN4BQ8IWT1 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC21.56■■□□□ 1.04
SCN4BQ8IWT1 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
SCN4BQ8IWT1 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SCN4BQ8IWT1 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
SCN4BQ8IWT1 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SCN4BQ8IWT1 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
SCN4BQ8IWT1 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SCN4BQ8IWT1 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SCN4BQ8IWT1 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SCN4BQ8IWT1 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SCN4BQ8IWT1 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SCN4BQ8IWT1 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SCN4BQ8IWT1 ESRRAP1-201ENST00000400596 1257 ntBASIC21.55■■□□□ 1.04
SCN4BQ8IWT1 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC21.55■■□□□ 1.04
SCN4BQ8IWT1 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC21.55■■□□□ 1.04
SCN4BQ8IWT1 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SCN4BQ8IWT1 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SCN4BQ8IWT1 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
SCN4BQ8IWT1 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SCN4BQ8IWT1 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SCN4BQ8IWT1 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SCN4BQ8IWT1 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
SCN4BQ8IWT1 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
SCN4BQ8IWT1 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC21.54■■□□□ 1.04
SCN4BQ8IWT1 C2orf69P4-201ENST00000565394 541 ntBASIC21.54■■□□□ 1.04
SCN4BQ8IWT1 AC060766.5-201ENST00000590539 871 ntBASIC21.54■■□□□ 1.04
SCN4BQ8IWT1 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC21.54■■□□□ 1.04
SCN4BQ8IWT1 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SCN4BQ8IWT1 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SCN4BQ8IWT1 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
SCN4BQ8IWT1 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
SCN4BQ8IWT1 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC21.54■■□□□ 1.04
SCN4BQ8IWT1 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
SCN4BQ8IWT1 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SCN4BQ8IWT1 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SCN4BQ8IWT1 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC21.53■■□□□ 1.04
SCN4BQ8IWT1 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
SCN4BQ8IWT1 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC21.53■■□□□ 1.04
SCN4BQ8IWT1 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC21.53■■□□□ 1.04
SCN4BQ8IWT1 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SCN4BQ8IWT1 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC21.53■■□□□ 1.04
SCN4BQ8IWT1 HLA-B-256ENST00000639848 1089 ntBASIC21.53■■□□□ 1.04
SCN4BQ8IWT1 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SCN4BQ8IWT1 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC21.53■■□□□ 1.04
SCN4BQ8IWT1 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
SCN4BQ8IWT1 AC092368.3-202ENST00000574180 1591 ntBASIC21.53■■□□□ 1.04
SCN4BQ8IWT1 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
SCN4BQ8IWT1 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SCN4BQ8IWT1 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
SCN4BQ8IWT1 AC026310.3-201ENST00000625186 2373 ntBASIC21.52■■□□□ 1.04
SCN4BQ8IWT1 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC21.52■■□□□ 1.04
SCN4BQ8IWT1 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SCN4BQ8IWT1 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SCN4BQ8IWT1 KRT18P29-201ENST00000397031 1267 ntBASIC21.52■■□□□ 1.04
SCN4BQ8IWT1 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC21.52■■□□□ 1.04
SCN4BQ8IWT1 UNC93B5-201ENST00000530315 699 ntBASIC21.52■■□□□ 1.04
SCN4BQ8IWT1 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SCN4BQ8IWT1 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SCN4BQ8IWT1 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SCN4BQ8IWT1 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SCN4BQ8IWT1 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
SCN4BQ8IWT1 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms