Protein–RNA interactions for Protein: Q86WS4

C12orf40, Uncharacterized protein C12orf40, humanhuman

Predictions only

Length 652 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf40Q86WS4 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
C12orf40Q86WS4 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC20.85■□□□□ 0.93
C12orf40Q86WS4 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
C12orf40Q86WS4 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
C12orf40Q86WS4 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
C12orf40Q86WS4 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
C12orf40Q86WS4 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
C12orf40Q86WS4 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
C12orf40Q86WS4 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
C12orf40Q86WS4 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC20.85■□□□□ 0.93
C12orf40Q86WS4 GGT1-206ENST00000404223 952 ntTSL 2 BASIC20.85■□□□□ 0.93
C12orf40Q86WS4 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
C12orf40Q86WS4 ARL16-209ENST00000573715 763 ntTSL 3 BASIC20.85■□□□□ 0.93
C12orf40Q86WS4 ARL16-211ENST00000576135 694 ntTSL 3 BASIC20.85■□□□□ 0.93
C12orf40Q86WS4 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
C12orf40Q86WS4 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
C12orf40Q86WS4 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
C12orf40Q86WS4 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
C12orf40Q86WS4 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
C12orf40Q86WS4 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
C12orf40Q86WS4 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
C12orf40Q86WS4 AC011484.1-201ENST00000377652 1995 ntBASIC20.85■□□□□ 0.93
C12orf40Q86WS4 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC20.85■□□□□ 0.93
C12orf40Q86WS4 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.84■□□□□ 0.93
C12orf40Q86WS4 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
C12orf40Q86WS4 MOK-233ENST00000524214 1539 ntTSL 2 BASIC20.84■□□□□ 0.93
C12orf40Q86WS4 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
C12orf40Q86WS4 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
C12orf40Q86WS4 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
C12orf40Q86WS4 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
C12orf40Q86WS4 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
C12orf40Q86WS4 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
C12orf40Q86WS4 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
C12orf40Q86WS4 AC005829.2-201ENST00000571422 1056 ntBASIC20.84■□□□□ 0.93
C12orf40Q86WS4 SPIB-206ENST00000596074 847 ntTSL 2 BASIC20.84■□□□□ 0.93
C12orf40Q86WS4 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
C12orf40Q86WS4 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
C12orf40Q86WS4 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
C12orf40Q86WS4 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC20.83■□□□□ 0.93
C12orf40Q86WS4 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.83■□□□□ 0.93
C12orf40Q86WS4 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.83■□□□□ 0.93
C12orf40Q86WS4 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
C12orf40Q86WS4 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
C12orf40Q86WS4 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.93
C12orf40Q86WS4 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
C12orf40Q86WS4 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
C12orf40Q86WS4 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC20.83■□□□□ 0.93
C12orf40Q86WS4 THEM4-205ENST00000489410 643 ntTSL 2 BASIC20.83■□□□□ 0.93
C12orf40Q86WS4 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.93
C12orf40Q86WS4 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC20.83■□□□□ 0.93
C12orf40Q86WS4 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
C12orf40Q86WS4 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC20.83■□□□□ 0.93
C12orf40Q86WS4 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
C12orf40Q86WS4 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
C12orf40Q86WS4 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
C12orf40Q86WS4 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
C12orf40Q86WS4 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
C12orf40Q86WS4 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC20.83■□□□□ 0.92
C12orf40Q86WS4 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
C12orf40Q86WS4 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
C12orf40Q86WS4 STK25-205ENST00000405883 1904 ntTSL 2 BASIC20.82■□□□□ 0.92
C12orf40Q86WS4 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.82■□□□□ 0.92
C12orf40Q86WS4 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
C12orf40Q86WS4 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
C12orf40Q86WS4 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
C12orf40Q86WS4 AL024507.2-201ENST00000606070 2574 ntBASIC20.82■□□□□ 0.92
C12orf40Q86WS4 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
C12orf40Q86WS4 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
C12orf40Q86WS4 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
C12orf40Q86WS4 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
C12orf40Q86WS4 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
C12orf40Q86WS4 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC20.82■□□□□ 0.92
C12orf40Q86WS4 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
C12orf40Q86WS4 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
C12orf40Q86WS4 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
C12orf40Q86WS4 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
C12orf40Q86WS4 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
C12orf40Q86WS4 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
C12orf40Q86WS4 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC20.81■□□□□ 0.92
C12orf40Q86WS4 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
C12orf40Q86WS4 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
C12orf40Q86WS4 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
C12orf40Q86WS4 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
C12orf40Q86WS4 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
C12orf40Q86WS4 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
C12orf40Q86WS4 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.81■□□□□ 0.92
C12orf40Q86WS4 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC20.81■□□□□ 0.92
C12orf40Q86WS4 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
C12orf40Q86WS4 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC20.81■□□□□ 0.92
C12orf40Q86WS4 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.81■□□□□ 0.92
C12orf40Q86WS4 Z99916.2-201ENST00000604037 246 ntBASIC20.81■□□□□ 0.92
C12orf40Q86WS4 MTDHP1-201ENST00000605323 784 ntBASIC20.81■□□□□ 0.92
C12orf40Q86WS4 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC20.81■□□□□ 0.92
C12orf40Q86WS4 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
C12orf40Q86WS4 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.81■□□□□ 0.92
C12orf40Q86WS4 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
C12orf40Q86WS4 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
C12orf40Q86WS4 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
C12orf40Q86WS4 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
C12orf40Q86WS4 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms