Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC20.38■□□□□ 0.85
LDB1Q86U70 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
LDB1Q86U70 DUX4L16-201ENST00000555130 1264 ntBASIC20.38■□□□□ 0.85
LDB1Q86U70 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.38■□□□□ 0.85
LDB1Q86U70 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC20.38■□□□□ 0.85
LDB1Q86U70 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
LDB1Q86U70 MIR2861-201ENST00000636310 90 ntBASIC20.38■□□□□ 0.85
LDB1Q86U70 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
LDB1Q86U70 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
LDB1Q86U70 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LDB1Q86U70 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
LDB1Q86U70 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
LDB1Q86U70 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LDB1Q86U70 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
LDB1Q86U70 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
LDB1Q86U70 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
LDB1Q86U70 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LDB1Q86U70 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20.37■□□□□ 0.85
LDB1Q86U70 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LDB1Q86U70 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LDB1Q86U70 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LDB1Q86U70 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
LDB1Q86U70 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LDB1Q86U70 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
LDB1Q86U70 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
LDB1Q86U70 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
LDB1Q86U70 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC20.37■□□□□ 0.85
LDB1Q86U70 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LDB1Q86U70 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
LDB1Q86U70 AC016405.3-201ENST00000607710 860 ntBASIC20.37■□□□□ 0.85
LDB1Q86U70 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
LDB1Q86U70 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.37■□□□□ 0.85
LDB1Q86U70 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LDB1Q86U70 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.37■□□□□ 0.85
LDB1Q86U70 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20.37■□□□□ 0.85
LDB1Q86U70 SLC25A24-204ENST00000569674 2357 ntBASIC20.37■□□□□ 0.85
LDB1Q86U70 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.37■□□□□ 0.85
LDB1Q86U70 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LDB1Q86U70 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.36■□□□□ 0.85
LDB1Q86U70 AL512408.1-201ENST00000569378 2000 ntBASIC20.36■□□□□ 0.85
LDB1Q86U70 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.36■□□□□ 0.85
LDB1Q86U70 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
LDB1Q86U70 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
LDB1Q86U70 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
LDB1Q86U70 CNN2P6-201ENST00000439038 900 ntBASIC20.36■□□□□ 0.85
LDB1Q86U70 VMO1-204ENST00000441199 741 ntTSL 2 BASIC20.36■□□□□ 0.85
LDB1Q86U70 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.36■□□□□ 0.85
LDB1Q86U70 CDV3P1-201ENST00000471403 739 ntBASIC20.36■□□□□ 0.85
LDB1Q86U70 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC20.36■□□□□ 0.85
LDB1Q86U70 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC20.36■□□□□ 0.85
LDB1Q86U70 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LDB1Q86U70 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LDB1Q86U70 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LDB1Q86U70 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LDB1Q86U70 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.36■□□□□ 0.85
LDB1Q86U70 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LDB1Q86U70 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.36■□□□□ 0.85
LDB1Q86U70 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LDB1Q86U70 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LDB1Q86U70 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
LDB1Q86U70 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
LDB1Q86U70 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.35■□□□□ 0.85
LDB1Q86U70 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
LDB1Q86U70 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LDB1Q86U70 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC20.35■□□□□ 0.85
LDB1Q86U70 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.35■□□□□ 0.85
LDB1Q86U70 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LDB1Q86U70 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
LDB1Q86U70 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
LDB1Q86U70 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
LDB1Q86U70 AC092437.1-201ENST00000624794 1048 ntBASIC20.35■□□□□ 0.85
LDB1Q86U70 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
LDB1Q86U70 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
LDB1Q86U70 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LDB1Q86U70 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
LDB1Q86U70 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC20.35■□□□□ 0.85
LDB1Q86U70 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
LDB1Q86U70 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC20.35■□□□□ 0.85
LDB1Q86U70 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.35■□□□□ 0.85
LDB1Q86U70 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.35■□□□□ 0.85
LDB1Q86U70 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LDB1Q86U70 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
LDB1Q86U70 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LDB1Q86U70 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LDB1Q86U70 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LDB1Q86U70 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
LDB1Q86U70 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
LDB1Q86U70 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LDB1Q86U70 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC20.34■□□□□ 0.85
LDB1Q86U70 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC20.34■□□□□ 0.85
LDB1Q86U70 AL591742.1-201ENST00000604433 565 ntBASIC20.34■□□□□ 0.85
LDB1Q86U70 BID-214ENST00000617586 542 ntTSL 5 BASIC20.34■□□□□ 0.85
LDB1Q86U70 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.34■□□□□ 0.85
LDB1Q86U70 AC013268.1-206ENST00000638368 961 ntBASIC20.34■□□□□ 0.85
LDB1Q86U70 AC112229.1-201ENST00000639295 961 ntBASIC20.34■□□□□ 0.85
LDB1Q86U70 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LDB1Q86U70 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.34■□□□□ 0.85
LDB1Q86U70 AC112907.3-201ENST00000577781 2400 ntBASIC20.34■□□□□ 0.85
LDB1Q86U70 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LDB1Q86U70 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms