Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC18.87■□□□□ 0.61
NUP54Q7Z3B4 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NUP54Q7Z3B4 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
NUP54Q7Z3B4 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NUP54Q7Z3B4 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC18.86■□□□□ 0.61
NUP54Q7Z3B4 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NUP54Q7Z3B4 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NUP54Q7Z3B4 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
NUP54Q7Z3B4 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
NUP54Q7Z3B4 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC18.86■□□□□ 0.61
NUP54Q7Z3B4 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC18.86■□□□□ 0.61
NUP54Q7Z3B4 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NUP54Q7Z3B4 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NUP54Q7Z3B4 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NUP54Q7Z3B4 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NUP54Q7Z3B4 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
NUP54Q7Z3B4 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NUP54Q7Z3B4 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
NUP54Q7Z3B4 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC18.86■□□□□ 0.61
NUP54Q7Z3B4 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.86■□□□□ 0.61
NUP54Q7Z3B4 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NUP54Q7Z3B4 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
NUP54Q7Z3B4 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
NUP54Q7Z3B4 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NUP54Q7Z3B4 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
NUP54Q7Z3B4 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
NUP54Q7Z3B4 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC18.85■□□□□ 0.61
NUP54Q7Z3B4 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
NUP54Q7Z3B4 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
NUP54Q7Z3B4 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NUP54Q7Z3B4 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
NUP54Q7Z3B4 AIRN-201ENST00000601203 4374 ntBASIC18.85■□□□□ 0.61
NUP54Q7Z3B4 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NUP54Q7Z3B4 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC18.85■□□□□ 0.61
NUP54Q7Z3B4 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC18.85■□□□□ 0.61
NUP54Q7Z3B4 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
NUP54Q7Z3B4 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NUP54Q7Z3B4 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC18.84■□□□□ 0.61
NUP54Q7Z3B4 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC18.84■□□□□ 0.61
NUP54Q7Z3B4 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
NUP54Q7Z3B4 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NUP54Q7Z3B4 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NUP54Q7Z3B4 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NUP54Q7Z3B4 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
NUP54Q7Z3B4 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
NUP54Q7Z3B4 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NUP54Q7Z3B4 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
NUP54Q7Z3B4 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NUP54Q7Z3B4 HLA-L-209ENST00000420110 1011 ntBASIC18.84■□□□□ 0.61
NUP54Q7Z3B4 PGM5P4-201ENST00000421970 445 ntBASIC18.84■□□□□ 0.61
NUP54Q7Z3B4 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC18.84■□□□□ 0.61
NUP54Q7Z3B4 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NUP54Q7Z3B4 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC18.84■□□□□ 0.61
NUP54Q7Z3B4 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC18.84■□□□□ 0.61
NUP54Q7Z3B4 AC104771.1-201ENST00000603335 964 ntBASIC18.84■□□□□ 0.61
NUP54Q7Z3B4 MARS-234ENST00000630571 216 ntTSL 5 BASIC18.84■□□□□ 0.61
NUP54Q7Z3B4 MARS-235ENST00000630803 183 ntTSL 3 BASIC18.84■□□□□ 0.61
NUP54Q7Z3B4 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC18.84■□□□□ 0.61
NUP54Q7Z3B4 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NUP54Q7Z3B4 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
NUP54Q7Z3B4 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
NUP54Q7Z3B4 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
NUP54Q7Z3B4 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
NUP54Q7Z3B4 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NUP54Q7Z3B4 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC18.84■□□□□ 0.61
NUP54Q7Z3B4 CYP21A1P-202ENST00000354927 1481 ntBASIC18.84■□□□□ 0.61
NUP54Q7Z3B4 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
NUP54Q7Z3B4 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
NUP54Q7Z3B4 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC18.83■□□□□ 0.61
NUP54Q7Z3B4 AC027702.1-201ENST00000563810 1770 ntBASIC18.83■□□□□ 0.61
NUP54Q7Z3B4 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
NUP54Q7Z3B4 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.61
NUP54Q7Z3B4 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.83■□□□□ 0.61
NUP54Q7Z3B4 ERF-202ENST00000440177 2032 ntTSL 2 BASIC18.83■□□□□ 0.61
NUP54Q7Z3B4 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
NUP54Q7Z3B4 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.61
NUP54Q7Z3B4 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NUP54Q7Z3B4 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC18.83■□□□□ 0.6
NUP54Q7Z3B4 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NUP54Q7Z3B4 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
NUP54Q7Z3B4 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC18.83■□□□□ 0.6
NUP54Q7Z3B4 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NUP54Q7Z3B4 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
NUP54Q7Z3B4 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC18.83■□□□□ 0.6
NUP54Q7Z3B4 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC18.83■□□□□ 0.6
NUP54Q7Z3B4 ISCU-212ENST00000547005 795 ntTSL 3 BASIC18.83■□□□□ 0.6
NUP54Q7Z3B4 CYP2T3P-201ENST00000601990 817 ntBASIC18.83■□□□□ 0.6
NUP54Q7Z3B4 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC18.83■□□□□ 0.6
NUP54Q7Z3B4 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
NUP54Q7Z3B4 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NUP54Q7Z3B4 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
NUP54Q7Z3B4 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.83■□□□□ 0.6
NUP54Q7Z3B4 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
NUP54Q7Z3B4 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
NUP54Q7Z3B4 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NUP54Q7Z3B4 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NUP54Q7Z3B4 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
NUP54Q7Z3B4 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NUP54Q7Z3B4 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
NUP54Q7Z3B4 KRT18P68-201ENST00000392293 1000 ntBASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms