Protein–RNA interactions for Protein: Q7Z398

ZNF550, Zinc finger protein 550, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550Q7Z398 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ZNF550Q7Z398 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
ZNF550Q7Z398 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ZNF550Q7Z398 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
ZNF550Q7Z398 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ZNF550Q7Z398 RAP2CP1-201ENST00000605103 478 ntBASIC18.78■□□□□ 0.6
ZNF550Q7Z398 GXYLT1P5-201ENST00000614548 1189 ntBASIC18.78■□□□□ 0.6
ZNF550Q7Z398 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
ZNF550Q7Z398 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
ZNF550Q7Z398 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC18.78■□□□□ 0.6
ZNF550Q7Z398 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC18.78■□□□□ 0.6
ZNF550Q7Z398 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
ZNF550Q7Z398 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC18.78■□□□□ 0.6
ZNF550Q7Z398 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
ZNF550Q7Z398 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ZNF550Q7Z398 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC18.77■□□□□ 0.6
ZNF550Q7Z398 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ZNF550Q7Z398 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
ZNF550Q7Z398 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ZNF550Q7Z398 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
ZNF550Q7Z398 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
ZNF550Q7Z398 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
ZNF550Q7Z398 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ZNF550Q7Z398 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
ZNF550Q7Z398 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
ZNF550Q7Z398 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
ZNF550Q7Z398 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
ZNF550Q7Z398 KRT18P11-201ENST00000435214 1283 ntBASIC18.77■□□□□ 0.6
ZNF550Q7Z398 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC18.77■□□□□ 0.6
ZNF550Q7Z398 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC18.77■□□□□ 0.6
ZNF550Q7Z398 AC011767.1-201ENST00000617410 1153 ntBASIC18.77■□□□□ 0.6
ZNF550Q7Z398 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
ZNF550Q7Z398 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.6
ZNF550Q7Z398 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ZNF550Q7Z398 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
ZNF550Q7Z398 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
ZNF550Q7Z398 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC18.77■□□□□ 0.59
ZNF550Q7Z398 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
ZNF550Q7Z398 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ZNF550Q7Z398 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.76■□□□□ 0.59
ZNF550Q7Z398 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ZNF550Q7Z398 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
ZNF550Q7Z398 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC18.76■□□□□ 0.59
ZNF550Q7Z398 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
ZNF550Q7Z398 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
ZNF550Q7Z398 SAPCD2P1-201ENST00000395413 1184 ntBASIC18.76■□□□□ 0.59
ZNF550Q7Z398 AC026185.1-201ENST00000445748 174 ntBASIC18.76■□□□□ 0.59
ZNF550Q7Z398 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC18.76■□□□□ 0.59
ZNF550Q7Z398 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC18.76■□□□□ 0.59
ZNF550Q7Z398 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ZNF550Q7Z398 MIR2861-201ENST00000636310 90 ntBASIC18.76■□□□□ 0.59
ZNF550Q7Z398 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.76■□□□□ 0.59
ZNF550Q7Z398 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ZNF550Q7Z398 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ZNF550Q7Z398 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC18.76■□□□□ 0.59
ZNF550Q7Z398 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ZNF550Q7Z398 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ZNF550Q7Z398 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ZNF550Q7Z398 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC18.76■□□□□ 0.59
ZNF550Q7Z398 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ZNF550Q7Z398 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
ZNF550Q7Z398 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
ZNF550Q7Z398 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC18.75■□□□□ 0.59
ZNF550Q7Z398 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ZNF550Q7Z398 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ZNF550Q7Z398 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
ZNF550Q7Z398 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ZNF550Q7Z398 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
ZNF550Q7Z398 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
ZNF550Q7Z398 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
ZNF550Q7Z398 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ZNF550Q7Z398 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
ZNF550Q7Z398 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ZNF550Q7Z398 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
ZNF550Q7Z398 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
ZNF550Q7Z398 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC18.75■□□□□ 0.59
ZNF550Q7Z398 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
ZNF550Q7Z398 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ZNF550Q7Z398 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC18.75■□□□□ 0.59
ZNF550Q7Z398 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
ZNF550Q7Z398 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ZNF550Q7Z398 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ZNF550Q7Z398 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ZNF550Q7Z398 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
ZNF550Q7Z398 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
ZNF550Q7Z398 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC18.74■□□□□ 0.59
ZNF550Q7Z398 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ZNF550Q7Z398 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
ZNF550Q7Z398 AC092720.2-201ENST00000602388 1665 ntBASIC18.74■□□□□ 0.59
ZNF550Q7Z398 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC18.74■□□□□ 0.59
ZNF550Q7Z398 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
ZNF550Q7Z398 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
ZNF550Q7Z398 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ZNF550Q7Z398 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC18.74■□□□□ 0.59
ZNF550Q7Z398 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC18.74■□□□□ 0.59
ZNF550Q7Z398 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC18.74■□□□□ 0.59
ZNF550Q7Z398 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC18.74■□□□□ 0.59
ZNF550Q7Z398 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ZNF550Q7Z398 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
ZNF550Q7Z398 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms