Protein–RNA interactions for Protein: Q6ZTQ4

CDHR3, Cadherin-related family member 3, humanhuman

Predictions only

Length 885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3Q6ZTQ4 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDHR3Q6ZTQ4 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDHR3Q6ZTQ4 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDHR3Q6ZTQ4 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
CDHR3Q6ZTQ4 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20.48■□□□□ 0.87
CDHR3Q6ZTQ4 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.48■□□□□ 0.87
CDHR3Q6ZTQ4 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CDHR3Q6ZTQ4 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDHR3Q6ZTQ4 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC20.48■□□□□ 0.87
CDHR3Q6ZTQ4 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CDHR3Q6ZTQ4 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDHR3Q6ZTQ4 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDHR3Q6ZTQ4 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDHR3Q6ZTQ4 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC20.48■□□□□ 0.87
CDHR3Q6ZTQ4 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC20.48■□□□□ 0.87
CDHR3Q6ZTQ4 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC20.48■□□□□ 0.87
CDHR3Q6ZTQ4 AC137761.2-201ENST00000561729 223 ntBASIC20.48■□□□□ 0.87
CDHR3Q6ZTQ4 EEF1DP3-203ENST00000566025 782 ntBASIC20.48■□□□□ 0.87
CDHR3Q6ZTQ4 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC20.48■□□□□ 0.87
CDHR3Q6ZTQ4 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC20.48■□□□□ 0.87
CDHR3Q6ZTQ4 AC145350.3-201ENST00000569033 163 ntBASIC20.48■□□□□ 0.87
CDHR3Q6ZTQ4 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC20.48■□□□□ 0.87
CDHR3Q6ZTQ4 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.48■□□□□ 0.87
CDHR3Q6ZTQ4 RNF165-205ENST00000588679 2904 ntBASIC20.48■□□□□ 0.87
CDHR3Q6ZTQ4 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
CDHR3Q6ZTQ4 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CDHR3Q6ZTQ4 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CDHR3Q6ZTQ4 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDHR3Q6ZTQ4 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDHR3Q6ZTQ4 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDHR3Q6ZTQ4 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDHR3Q6ZTQ4 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.47■□□□□ 0.87
CDHR3Q6ZTQ4 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC20.47■□□□□ 0.87
CDHR3Q6ZTQ4 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CDHR3Q6ZTQ4 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC20.47■□□□□ 0.87
CDHR3Q6ZTQ4 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CDHR3Q6ZTQ4 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.47■□□□□ 0.87
CDHR3Q6ZTQ4 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
CDHR3Q6ZTQ4 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.47■□□□□ 0.87
CDHR3Q6ZTQ4 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDHR3Q6ZTQ4 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDHR3Q6ZTQ4 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDHR3Q6ZTQ4 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDHR3Q6ZTQ4 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CDHR3Q6ZTQ4 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
CDHR3Q6ZTQ4 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
CDHR3Q6ZTQ4 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC20.46■□□□□ 0.87
CDHR3Q6ZTQ4 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDHR3Q6ZTQ4 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDHR3Q6ZTQ4 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDHR3Q6ZTQ4 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CDHR3Q6ZTQ4 AC006015.1-201ENST00000429970 570 ntBASIC20.46■□□□□ 0.87
CDHR3Q6ZTQ4 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC20.46■□□□□ 0.87
CDHR3Q6ZTQ4 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC20.46■□□□□ 0.87
CDHR3Q6ZTQ4 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC20.46■□□□□ 0.87
CDHR3Q6ZTQ4 AC104187.1-201ENST00000607510 612 ntBASIC20.46■□□□□ 0.87
CDHR3Q6ZTQ4 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC20.46■□□□□ 0.87
CDHR3Q6ZTQ4 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC20.46■□□□□ 0.87
CDHR3Q6ZTQ4 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
CDHR3Q6ZTQ4 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.46■□□□□ 0.87
CDHR3Q6ZTQ4 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CDHR3Q6ZTQ4 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDHR3Q6ZTQ4 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.46■□□□□ 0.87
CDHR3Q6ZTQ4 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.87
CDHR3Q6ZTQ4 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.45■□□□□ 0.86
CDHR3Q6ZTQ4 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
CDHR3Q6ZTQ4 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CDHR3Q6ZTQ4 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
CDHR3Q6ZTQ4 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.45■□□□□ 0.86
CDHR3Q6ZTQ4 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.45■□□□□ 0.86
CDHR3Q6ZTQ4 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CDHR3Q6ZTQ4 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CDHR3Q6ZTQ4 HSCB-202ENST00000398941 955 ntTSL 2 BASIC20.45■□□□□ 0.86
CDHR3Q6ZTQ4 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.45■□□□□ 0.86
CDHR3Q6ZTQ4 AC016769.1-201ENST00000409132 1010 ntBASIC20.45■□□□□ 0.86
CDHR3Q6ZTQ4 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CDHR3Q6ZTQ4 DLX3-202ENST00000512495 834 ntTSL 2 BASIC20.45■□□□□ 0.86
CDHR3Q6ZTQ4 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CDHR3Q6ZTQ4 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CDHR3Q6ZTQ4 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
CDHR3Q6ZTQ4 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDHR3Q6ZTQ4 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.44■□□□□ 0.86
CDHR3Q6ZTQ4 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC20.44■□□□□ 0.86
CDHR3Q6ZTQ4 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDHR3Q6ZTQ4 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.44■□□□□ 0.86
CDHR3Q6ZTQ4 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDHR3Q6ZTQ4 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC20.44■□□□□ 0.86
CDHR3Q6ZTQ4 AC053503.5-201ENST00000601508 636 ntBASIC20.44■□□□□ 0.86
CDHR3Q6ZTQ4 RARRES2P11-201ENST00000635158 484 ntBASIC20.44■□□□□ 0.86
CDHR3Q6ZTQ4 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDHR3Q6ZTQ4 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDHR3Q6ZTQ4 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC20.44■□□□□ 0.86
CDHR3Q6ZTQ4 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDHR3Q6ZTQ4 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
CDHR3Q6ZTQ4 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDHR3Q6ZTQ4 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC20.44■□□□□ 0.86
CDHR3Q6ZTQ4 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDHR3Q6ZTQ4 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CDHR3Q6ZTQ4 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDHR3Q6ZTQ4 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms