Protein–RNA interactions for Protein: Q6PEY2

TUBA3E, Tubulin alpha-3E chain, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA3EQ6PEY2 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TUBA3EQ6PEY2 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
TUBA3EQ6PEY2 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC19.27■□□□□ 0.68
TUBA3EQ6PEY2 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TUBA3EQ6PEY2 LINC01006-201ENST00000333319 2292 ntBASIC19.27■□□□□ 0.68
TUBA3EQ6PEY2 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.27■□□□□ 0.68
TUBA3EQ6PEY2 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.27■□□□□ 0.68
TUBA3EQ6PEY2 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TUBA3EQ6PEY2 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TUBA3EQ6PEY2 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.68
TUBA3EQ6PEY2 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TUBA3EQ6PEY2 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TUBA3EQ6PEY2 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TUBA3EQ6PEY2 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
TUBA3EQ6PEY2 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC19.27■□□□□ 0.68
TUBA3EQ6PEY2 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TUBA3EQ6PEY2 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TUBA3EQ6PEY2 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC19.27■□□□□ 0.68
TUBA3EQ6PEY2 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC19.27■□□□□ 0.68
TUBA3EQ6PEY2 AC069236.1-201ENST00000604339 616 ntBASIC19.27■□□□□ 0.68
TUBA3EQ6PEY2 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TUBA3EQ6PEY2 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.27■□□□□ 0.68
TUBA3EQ6PEY2 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
TUBA3EQ6PEY2 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
TUBA3EQ6PEY2 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.27■□□□□ 0.67
TUBA3EQ6PEY2 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
TUBA3EQ6PEY2 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
TUBA3EQ6PEY2 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.27■□□□□ 0.67
TUBA3EQ6PEY2 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TUBA3EQ6PEY2 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
TUBA3EQ6PEY2 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.26■□□□□ 0.67
TUBA3EQ6PEY2 FEM1AP4-201ENST00000443167 1987 ntBASIC19.26■□□□□ 0.67
TUBA3EQ6PEY2 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TUBA3EQ6PEY2 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
TUBA3EQ6PEY2 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TUBA3EQ6PEY2 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.26■□□□□ 0.67
TUBA3EQ6PEY2 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
TUBA3EQ6PEY2 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.26■□□□□ 0.67
TUBA3EQ6PEY2 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TUBA3EQ6PEY2 AC243732.1-201ENST00000612648 864 ntBASIC19.26■□□□□ 0.67
TUBA3EQ6PEY2 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TUBA3EQ6PEY2 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.26■□□□□ 0.67
TUBA3EQ6PEY2 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC19.26■□□□□ 0.67
TUBA3EQ6PEY2 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.26■□□□□ 0.67
TUBA3EQ6PEY2 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TUBA3EQ6PEY2 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TUBA3EQ6PEY2 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
TUBA3EQ6PEY2 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
TUBA3EQ6PEY2 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TUBA3EQ6PEY2 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
TUBA3EQ6PEY2 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TUBA3EQ6PEY2 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TUBA3EQ6PEY2 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
TUBA3EQ6PEY2 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
TUBA3EQ6PEY2 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
TUBA3EQ6PEY2 AC069152.1-201ENST00000438030 544 ntBASIC19.25■□□□□ 0.67
TUBA3EQ6PEY2 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TUBA3EQ6PEY2 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TUBA3EQ6PEY2 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
TUBA3EQ6PEY2 RGMA-211ENST00000557420 989 ntTSL 3 BASIC19.25■□□□□ 0.67
TUBA3EQ6PEY2 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC19.25■□□□□ 0.67
TUBA3EQ6PEY2 KLF13-207ENST00000560473 489 ntTSL 3 BASIC19.25■□□□□ 0.67
TUBA3EQ6PEY2 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TUBA3EQ6PEY2 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC19.25■□□□□ 0.67
TUBA3EQ6PEY2 AC016405.3-201ENST00000607710 860 ntBASIC19.25■□□□□ 0.67
TUBA3EQ6PEY2 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC19.25■□□□□ 0.67
TUBA3EQ6PEY2 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
TUBA3EQ6PEY2 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.25■□□□□ 0.67
TUBA3EQ6PEY2 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TUBA3EQ6PEY2 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC19.25■□□□□ 0.67
TUBA3EQ6PEY2 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TUBA3EQ6PEY2 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
TUBA3EQ6PEY2 MKRN4P-201ENST00000444706 1521 ntBASIC19.25■□□□□ 0.67
TUBA3EQ6PEY2 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.25■□□□□ 0.67
TUBA3EQ6PEY2 Z98882.1-201ENST00000622160 2253 ntBASIC19.25■□□□□ 0.67
TUBA3EQ6PEY2 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
TUBA3EQ6PEY2 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TUBA3EQ6PEY2 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TUBA3EQ6PEY2 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TUBA3EQ6PEY2 AC093787.1-201ENST00000450396 207 ntBASIC19.24■□□□□ 0.67
TUBA3EQ6PEY2 CD99P1-205ENST00000527459 561 ntBASIC19.24■□□□□ 0.67
TUBA3EQ6PEY2 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC19.24■□□□□ 0.67
TUBA3EQ6PEY2 AL591742.1-201ENST00000604433 565 ntBASIC19.24■□□□□ 0.67
TUBA3EQ6PEY2 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC19.24■□□□□ 0.67
TUBA3EQ6PEY2 MARS-234ENST00000630571 216 ntTSL 5 BASIC19.24■□□□□ 0.67
TUBA3EQ6PEY2 MARS-235ENST00000630803 183 ntTSL 3 BASIC19.24■□□□□ 0.67
TUBA3EQ6PEY2 AC133041.1-202ENST00000642053 222 ntBASIC19.24■□□□□ 0.67
TUBA3EQ6PEY2 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TUBA3EQ6PEY2 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TUBA3EQ6PEY2 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TUBA3EQ6PEY2 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TUBA3EQ6PEY2 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
TUBA3EQ6PEY2 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TUBA3EQ6PEY2 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
TUBA3EQ6PEY2 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TUBA3EQ6PEY2 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.23■□□□□ 0.67
TUBA3EQ6PEY2 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
TUBA3EQ6PEY2 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.23■□□□□ 0.67
TUBA3EQ6PEY2 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.23■□□□□ 0.67
TUBA3EQ6PEY2 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms