Protein–RNA interactions for Protein: Q6NSX1

CCDC70, Coiled-coil domain-containing protein 70, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC70Q6NSX1 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC21.83■■□□□ 1.08
CCDC70Q6NSX1 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC21.83■■□□□ 1.08
CCDC70Q6NSX1 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
CCDC70Q6NSX1 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
CCDC70Q6NSX1 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC21.83■■□□□ 1.08
CCDC70Q6NSX1 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
CCDC70Q6NSX1 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
CCDC70Q6NSX1 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CCDC70Q6NSX1 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CCDC70Q6NSX1 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC21.82■■□□□ 1.08
CCDC70Q6NSX1 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
CCDC70Q6NSX1 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC21.82■■□□□ 1.08
CCDC70Q6NSX1 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CCDC70Q6NSX1 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CCDC70Q6NSX1 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CCDC70Q6NSX1 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
CCDC70Q6NSX1 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC21.82■■□□□ 1.08
CCDC70Q6NSX1 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC21.82■■□□□ 1.08
CCDC70Q6NSX1 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CCDC70Q6NSX1 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC21.82■■□□□ 1.08
CCDC70Q6NSX1 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC21.82■■□□□ 1.08
CCDC70Q6NSX1 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CCDC70Q6NSX1 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC21.82■■□□□ 1.08
CCDC70Q6NSX1 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
CCDC70Q6NSX1 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CCDC70Q6NSX1 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CCDC70Q6NSX1 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC21.82■■□□□ 1.08
CCDC70Q6NSX1 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC21.82■■□□□ 1.08
CCDC70Q6NSX1 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CCDC70Q6NSX1 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
CCDC70Q6NSX1 NARF-205ENST00000412079 1760 ntTSL 5 BASIC21.82■■□□□ 1.08
CCDC70Q6NSX1 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
CCDC70Q6NSX1 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
CCDC70Q6NSX1 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
CCDC70Q6NSX1 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
CCDC70Q6NSX1 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CCDC70Q6NSX1 HYI-206ENST00000372434 1025 ntTSL 5 BASIC21.81■■□□□ 1.08
CCDC70Q6NSX1 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CCDC70Q6NSX1 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
CCDC70Q6NSX1 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CCDC70Q6NSX1 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
CCDC70Q6NSX1 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
CCDC70Q6NSX1 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC21.81■■□□□ 1.08
CCDC70Q6NSX1 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CCDC70Q6NSX1 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
CCDC70Q6NSX1 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC21.81■■□□□ 1.08
CCDC70Q6NSX1 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
CCDC70Q6NSX1 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC70Q6NSX1 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC70Q6NSX1 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC21.8■■□□□ 1.08
CCDC70Q6NSX1 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
CCDC70Q6NSX1 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC21.8■■□□□ 1.08
CCDC70Q6NSX1 STX5-203ENST00000394690 1568 ntTSL 5 BASIC21.8■■□□□ 1.08
CCDC70Q6NSX1 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC21.8■■□□□ 1.08
CCDC70Q6NSX1 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC70Q6NSX1 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC21.8■■□□□ 1.08
CCDC70Q6NSX1 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC21.8■■□□□ 1.08
CCDC70Q6NSX1 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC21.8■■□□□ 1.08
CCDC70Q6NSX1 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC70Q6NSX1 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC70Q6NSX1 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC21.79■■□□□ 1.08
CCDC70Q6NSX1 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC21.79■■□□□ 1.08
CCDC70Q6NSX1 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC70Q6NSX1 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC70Q6NSX1 USP39-204ENST00000409766 2033 ntTSL 2 BASIC21.79■■□□□ 1.08
CCDC70Q6NSX1 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC21.79■■□□□ 1.08
CCDC70Q6NSX1 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
CCDC70Q6NSX1 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC70Q6NSX1 LHPP-203ENST00000392757 840 ntTSL 3 BASIC21.79■■□□□ 1.08
CCDC70Q6NSX1 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC21.79■■□□□ 1.08
CCDC70Q6NSX1 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC21.79■■□□□ 1.08
CCDC70Q6NSX1 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
CCDC70Q6NSX1 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC70Q6NSX1 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC70Q6NSX1 DET1-207ENST00000564406 2315 ntTSL 2 BASIC21.79■■□□□ 1.08
CCDC70Q6NSX1 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC70Q6NSX1 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC70Q6NSX1 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
CCDC70Q6NSX1 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC70Q6NSX1 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC21.79■■□□□ 1.08
CCDC70Q6NSX1 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC21.78■■□□□ 1.08
CCDC70Q6NSX1 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC70Q6NSX1 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC70Q6NSX1 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
CCDC70Q6NSX1 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC21.78■■□□□ 1.08
CCDC70Q6NSX1 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC21.78■■□□□ 1.08
CCDC70Q6NSX1 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC70Q6NSX1 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC70Q6NSX1 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC70Q6NSX1 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
CCDC70Q6NSX1 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC70Q6NSX1 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC70Q6NSX1 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC70Q6NSX1 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC70Q6NSX1 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC70Q6NSX1 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC70Q6NSX1 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC70Q6NSX1 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC70Q6NSX1 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC21.77■■□□□ 1.08
CCDC70Q6NSX1 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms