Protein–RNA interactions for Protein: Q6ICC9

RTL6, Retrotransposon Gag-like protein 6, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL6Q6ICC9 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC18.42■□□□□ 0.54
RTL6Q6ICC9 AC128676.1-201ENST00000454392 318 ntBASIC18.42■□□□□ 0.54
RTL6Q6ICC9 AC026366.1-201ENST00000488803 879 ntBASIC18.42■□□□□ 0.54
RTL6Q6ICC9 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC18.42■□□□□ 0.54
RTL6Q6ICC9 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC18.42■□□□□ 0.54
RTL6Q6ICC9 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC18.42■□□□□ 0.54
RTL6Q6ICC9 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC18.42■□□□□ 0.54
RTL6Q6ICC9 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RTL6Q6ICC9 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RTL6Q6ICC9 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC18.42■□□□□ 0.54
RTL6Q6ICC9 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
RTL6Q6ICC9 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RTL6Q6ICC9 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RTL6Q6ICC9 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RTL6Q6ICC9 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
RTL6Q6ICC9 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
RTL6Q6ICC9 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RTL6Q6ICC9 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RTL6Q6ICC9 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RTL6Q6ICC9 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC18.41■□□□□ 0.54
RTL6Q6ICC9 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
RTL6Q6ICC9 GCSHP5-201ENST00000443090 522 ntBASIC18.41■□□□□ 0.54
RTL6Q6ICC9 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RTL6Q6ICC9 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
RTL6Q6ICC9 PALM-208ENST00000592155 2272 ntTSL 4 BASIC18.4■□□□□ 0.54
RTL6Q6ICC9 AL024507.2-201ENST00000606070 2574 ntBASIC18.4■□□□□ 0.54
RTL6Q6ICC9 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RTL6Q6ICC9 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RTL6Q6ICC9 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RTL6Q6ICC9 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RTL6Q6ICC9 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
RTL6Q6ICC9 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC18.4■□□□□ 0.54
RTL6Q6ICC9 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
RTL6Q6ICC9 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
RTL6Q6ICC9 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RTL6Q6ICC9 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RTL6Q6ICC9 AP003097.1-201ENST00000530657 1135 ntBASIC18.4■□□□□ 0.54
RTL6Q6ICC9 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RTL6Q6ICC9 IRX5-204ENST00000560154 879 ntTSL 5 BASIC18.4■□□□□ 0.54
RTL6Q6ICC9 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RTL6Q6ICC9 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RTL6Q6ICC9 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RTL6Q6ICC9 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC18.4■□□□□ 0.54
RTL6Q6ICC9 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RTL6Q6ICC9 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
RTL6Q6ICC9 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
RTL6Q6ICC9 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RTL6Q6ICC9 CYP21A1P-202ENST00000354927 1481 ntBASIC18.39■□□□□ 0.54
RTL6Q6ICC9 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
RTL6Q6ICC9 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
RTL6Q6ICC9 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
RTL6Q6ICC9 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
RTL6Q6ICC9 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RTL6Q6ICC9 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
RTL6Q6ICC9 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC18.39■□□□□ 0.53
RTL6Q6ICC9 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RTL6Q6ICC9 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RTL6Q6ICC9 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
RTL6Q6ICC9 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC18.39■□□□□ 0.53
RTL6Q6ICC9 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC18.39■□□□□ 0.53
RTL6Q6ICC9 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC18.39■□□□□ 0.53
RTL6Q6ICC9 AC060766.5-201ENST00000590539 871 ntBASIC18.39■□□□□ 0.53
RTL6Q6ICC9 HLA-B-256ENST00000639848 1089 ntBASIC18.39■□□□□ 0.53
RTL6Q6ICC9 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RTL6Q6ICC9 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RTL6Q6ICC9 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC18.39■□□□□ 0.53
RTL6Q6ICC9 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
RTL6Q6ICC9 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
RTL6Q6ICC9 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RTL6Q6ICC9 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RTL6Q6ICC9 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RTL6Q6ICC9 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.38■□□□□ 0.53
RTL6Q6ICC9 TUB-203ENST00000534099 1759 ntTSL 2 BASIC18.38■□□□□ 0.53
RTL6Q6ICC9 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RTL6Q6ICC9 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
RTL6Q6ICC9 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RTL6Q6ICC9 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RTL6Q6ICC9 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
RTL6Q6ICC9 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC18.38■□□□□ 0.53
RTL6Q6ICC9 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC18.38■□□□□ 0.53
RTL6Q6ICC9 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC18.38■□□□□ 0.53
RTL6Q6ICC9 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
RTL6Q6ICC9 AC008403.3-201ENST00000598924 454 ntBASIC18.38■□□□□ 0.53
RTL6Q6ICC9 MMD2-204ENST00000612910 778 ntTSL 5 BASIC18.38■□□□□ 0.53
RTL6Q6ICC9 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
RTL6Q6ICC9 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RTL6Q6ICC9 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC18.38■□□□□ 0.53
RTL6Q6ICC9 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
RTL6Q6ICC9 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
RTL6Q6ICC9 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.38■□□□□ 0.53
RTL6Q6ICC9 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
RTL6Q6ICC9 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RTL6Q6ICC9 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RTL6Q6ICC9 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RTL6Q6ICC9 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC18.38■□□□□ 0.53
RTL6Q6ICC9 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
RTL6Q6ICC9 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
RTL6Q6ICC9 MFF-203ENST00000349901 1716 ntTSL 2 BASIC18.37■□□□□ 0.53
RTL6Q6ICC9 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
RTL6Q6ICC9 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms