Protein–RNA interactions for Protein: Q5T3J3

LRIF1, Ligand-dependent nuclear receptor-interacting factor 1, humanhuman

Predictions only

Length 769 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1Q5T3J3 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC19.25■□□□□ 0.67
LRIF1Q5T3J3 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LRIF1Q5T3J3 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC19.25■□□□□ 0.67
LRIF1Q5T3J3 DUX4L2-201ENST00000561772 1275 ntBASIC19.25■□□□□ 0.67
LRIF1Q5T3J3 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
LRIF1Q5T3J3 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19.25■□□□□ 0.67
LRIF1Q5T3J3 DUX4L6-201ENST00000626483 1275 ntBASIC19.25■□□□□ 0.67
LRIF1Q5T3J3 DUX4L1-201ENST00000627662 1275 ntBASIC19.25■□□□□ 0.67
LRIF1Q5T3J3 DUX4L8-201ENST00000629013 1275 ntBASIC19.25■□□□□ 0.67
LRIF1Q5T3J3 DUX4L3-201ENST00000630187 1275 ntBASIC19.25■□□□□ 0.67
LRIF1Q5T3J3 DUX4L7-201ENST00000630678 1275 ntBASIC19.25■□□□□ 0.67
LRIF1Q5T3J3 DUX4L5-201ENST00000630834 1275 ntBASIC19.25■□□□□ 0.67
LRIF1Q5T3J3 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LRIF1Q5T3J3 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
LRIF1Q5T3J3 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LRIF1Q5T3J3 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19.25■□□□□ 0.67
LRIF1Q5T3J3 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LRIF1Q5T3J3 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.25■□□□□ 0.67
LRIF1Q5T3J3 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LRIF1Q5T3J3 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.24■□□□□ 0.67
LRIF1Q5T3J3 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.24■□□□□ 0.67
LRIF1Q5T3J3 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LRIF1Q5T3J3 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LRIF1Q5T3J3 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LRIF1Q5T3J3 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC19.24■□□□□ 0.67
LRIF1Q5T3J3 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.24■□□□□ 0.67
LRIF1Q5T3J3 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
LRIF1Q5T3J3 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
LRIF1Q5T3J3 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LRIF1Q5T3J3 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC19.24■□□□□ 0.67
LRIF1Q5T3J3 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC19.24■□□□□ 0.67
LRIF1Q5T3J3 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LRIF1Q5T3J3 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LRIF1Q5T3J3 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LRIF1Q5T3J3 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LRIF1Q5T3J3 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LRIF1Q5T3J3 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LRIF1Q5T3J3 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LRIF1Q5T3J3 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LRIF1Q5T3J3 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
LRIF1Q5T3J3 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
LRIF1Q5T3J3 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LRIF1Q5T3J3 SMG8-203ENST00000578922 2178 ntBASIC19.23■□□□□ 0.67
LRIF1Q5T3J3 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LRIF1Q5T3J3 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC19.23■□□□□ 0.67
LRIF1Q5T3J3 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.23■□□□□ 0.67
LRIF1Q5T3J3 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LRIF1Q5T3J3 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LRIF1Q5T3J3 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC19.23■□□□□ 0.67
LRIF1Q5T3J3 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.23■□□□□ 0.67
LRIF1Q5T3J3 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LRIF1Q5T3J3 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
LRIF1Q5T3J3 SLC7A5P2-201ENST00000553010 536 ntBASIC19.23■□□□□ 0.67
LRIF1Q5T3J3 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC19.23■□□□□ 0.67
LRIF1Q5T3J3 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
LRIF1Q5T3J3 AL139246.5-201ENST00000606645 996 ntBASIC19.23■□□□□ 0.67
LRIF1Q5T3J3 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC19.23■□□□□ 0.67
LRIF1Q5T3J3 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LRIF1Q5T3J3 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LRIF1Q5T3J3 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
LRIF1Q5T3J3 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC19.23■□□□□ 0.67
LRIF1Q5T3J3 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LRIF1Q5T3J3 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
LRIF1Q5T3J3 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LRIF1Q5T3J3 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
LRIF1Q5T3J3 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
LRIF1Q5T3J3 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LRIF1Q5T3J3 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LRIF1Q5T3J3 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LRIF1Q5T3J3 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC19.22■□□□□ 0.67
LRIF1Q5T3J3 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LRIF1Q5T3J3 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LRIF1Q5T3J3 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LRIF1Q5T3J3 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.22■□□□□ 0.67
LRIF1Q5T3J3 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LRIF1Q5T3J3 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LRIF1Q5T3J3 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
LRIF1Q5T3J3 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.21■□□□□ 0.67
LRIF1Q5T3J3 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
LRIF1Q5T3J3 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
LRIF1Q5T3J3 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.21■□□□□ 0.67
LRIF1Q5T3J3 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC19.21■□□□□ 0.67
LRIF1Q5T3J3 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LRIF1Q5T3J3 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
LRIF1Q5T3J3 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC19.21■□□□□ 0.67
LRIF1Q5T3J3 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC19.21■□□□□ 0.67
LRIF1Q5T3J3 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC19.21■□□□□ 0.67
LRIF1Q5T3J3 AC142381.2-201ENST00000566120 298 ntBASIC19.21■□□□□ 0.67
LRIF1Q5T3J3 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC19.21■□□□□ 0.67
LRIF1Q5T3J3 AC104187.1-201ENST00000607510 612 ntBASIC19.21■□□□□ 0.67
LRIF1Q5T3J3 AC243732.1-201ENST00000612648 864 ntBASIC19.21■□□□□ 0.67
LRIF1Q5T3J3 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
LRIF1Q5T3J3 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LRIF1Q5T3J3 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.21■□□□□ 0.67
LRIF1Q5T3J3 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
LRIF1Q5T3J3 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
LRIF1Q5T3J3 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LRIF1Q5T3J3 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LRIF1Q5T3J3 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LRIF1Q5T3J3 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms