Protein–RNA interactions for Protein: Q5RL73

RBM48, RNA-binding protein 48, humanhuman

Known RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBM48Q5RL73 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RBM48Q5RL73 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.62■□□□□ 0.57
RBM48Q5RL73 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RBM48Q5RL73 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC18.62■□□□□ 0.57
RBM48Q5RL73 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RBM48Q5RL73 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RBM48Q5RL73 EXOG-217ENST00000630638 197 ntTSL 5 BASIC18.62■□□□□ 0.57
RBM48Q5RL73 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
RBM48Q5RL73 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RBM48Q5RL73 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RBM48Q5RL73 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RBM48Q5RL73 TMEM179-206ENST00000616017 1645 ntBASIC18.62■□□□□ 0.57
RBM48Q5RL73 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
RBM48Q5RL73 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC18.62■□□□□ 0.57
RBM48Q5RL73 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18.62■□□□□ 0.57
RBM48Q5RL73 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RBM48Q5RL73 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
RBM48Q5RL73 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
RBM48Q5RL73 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC18.62■□□□□ 0.57
RBM48Q5RL73 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
RBM48Q5RL73 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RBM48Q5RL73 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RBM48Q5RL73 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
RBM48Q5RL73 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.61■□□□□ 0.57
RBM48Q5RL73 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RBM48Q5RL73 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RBM48Q5RL73 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
RBM48Q5RL73 AC093484.2-201ENST00000580996 2166 ntBASIC18.61■□□□□ 0.57
RBM48Q5RL73 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RBM48Q5RL73 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RBM48Q5RL73 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RBM48Q5RL73 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC18.61■□□□□ 0.57
RBM48Q5RL73 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RBM48Q5RL73 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
RBM48Q5RL73 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RBM48Q5RL73 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC18.61■□□□□ 0.57
RBM48Q5RL73 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RBM48Q5RL73 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC18.61■□□□□ 0.57
RBM48Q5RL73 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
RBM48Q5RL73 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
RBM48Q5RL73 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
RBM48Q5RL73 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
RBM48Q5RL73 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
RBM48Q5RL73 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RBM48Q5RL73 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RBM48Q5RL73 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RBM48Q5RL73 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RBM48Q5RL73 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RBM48Q5RL73 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC18.6■□□□□ 0.57
RBM48Q5RL73 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RBM48Q5RL73 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RBM48Q5RL73 NEFHP1-201ENST00000412845 2629 ntBASIC18.6■□□□□ 0.57
RBM48Q5RL73 STAC-204ENST00000457375 1366 ntTSL 2 BASIC18.6■□□□□ 0.57
RBM48Q5RL73 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RBM48Q5RL73 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.6■□□□□ 0.57
RBM48Q5RL73 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
RBM48Q5RL73 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
RBM48Q5RL73 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RBM48Q5RL73 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
RBM48Q5RL73 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
RBM48Q5RL73 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
RBM48Q5RL73 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RBM48Q5RL73 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.6■□□□□ 0.57
RBM48Q5RL73 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.6■□□□□ 0.57
RBM48Q5RL73 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
RBM48Q5RL73 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.6■□□□□ 0.57
RBM48Q5RL73 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
RBM48Q5RL73 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
RBM48Q5RL73 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RBM48Q5RL73 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RBM48Q5RL73 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
RBM48Q5RL73 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
RBM48Q5RL73 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RBM48Q5RL73 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.59■□□□□ 0.57
RBM48Q5RL73 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
RBM48Q5RL73 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC18.59■□□□□ 0.57
RBM48Q5RL73 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
RBM48Q5RL73 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
RBM48Q5RL73 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
RBM48Q5RL73 KRT125P-201ENST00000546827 989 ntBASIC18.59■□□□□ 0.57
RBM48Q5RL73 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RBM48Q5RL73 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RBM48Q5RL73 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
RBM48Q5RL73 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
RBM48Q5RL73 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC18.59■□□□□ 0.57
RBM48Q5RL73 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RBM48Q5RL73 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC18.58■□□□□ 0.57
RBM48Q5RL73 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.58■□□□□ 0.57
RBM48Q5RL73 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
RBM48Q5RL73 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
RBM48Q5RL73 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
RBM48Q5RL73 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
RBM48Q5RL73 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
RBM48Q5RL73 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
RBM48Q5RL73 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RBM48Q5RL73 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RBM48Q5RL73 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
RBM48Q5RL73 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RBM48Q5RL73 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
RBM48Q5RL73 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms