Protein–RNA interactions for Protein: Q5H8C1

FREM1, FRAS1-related extracellular matrix protein 1, humanhuman

Predictions only

Length 2,179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM1Q5H8C1 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18■□□□□ 0.47
FREM1Q5H8C1 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
FREM1Q5H8C1 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
FREM1Q5H8C1 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
FREM1Q5H8C1 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
FREM1Q5H8C1 ERF-202ENST00000440177 2032 ntTSL 2 BASIC17.99■□□□□ 0.47
FREM1Q5H8C1 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
FREM1Q5H8C1 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
FREM1Q5H8C1 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
FREM1Q5H8C1 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
FREM1Q5H8C1 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
FREM1Q5H8C1 USP48-205ENST00000421625 2818 ntTSL 2 BASIC17.99■□□□□ 0.47
FREM1Q5H8C1 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
FREM1Q5H8C1 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
FREM1Q5H8C1 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC17.99■□□□□ 0.47
FREM1Q5H8C1 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
FREM1Q5H8C1 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC17.99■□□□□ 0.47
FREM1Q5H8C1 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC17.99■□□□□ 0.47
FREM1Q5H8C1 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
FREM1Q5H8C1 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
FREM1Q5H8C1 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC17.99■□□□□ 0.47
FREM1Q5H8C1 STAC-204ENST00000457375 1366 ntTSL 2 BASIC17.99■□□□□ 0.47
FREM1Q5H8C1 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
FREM1Q5H8C1 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
FREM1Q5H8C1 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC17.99■□□□□ 0.47
FREM1Q5H8C1 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
FREM1Q5H8C1 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
FREM1Q5H8C1 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
FREM1Q5H8C1 AL589743.5-201ENST00000616611 1050 ntBASIC17.98■□□□□ 0.47
FREM1Q5H8C1 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC17.98■□□□□ 0.47
FREM1Q5H8C1 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
FREM1Q5H8C1 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
FREM1Q5H8C1 CYP21A1P-202ENST00000354927 1481 ntBASIC17.98■□□□□ 0.47
FREM1Q5H8C1 EFS-203ENST00000429593 2610 ntTSL 2 BASIC17.98■□□□□ 0.47
FREM1Q5H8C1 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC17.98■□□□□ 0.47
FREM1Q5H8C1 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
FREM1Q5H8C1 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
FREM1Q5H8C1 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC17.98■□□□□ 0.47
FREM1Q5H8C1 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC17.98■□□□□ 0.47
FREM1Q5H8C1 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC17.98■□□□□ 0.47
FREM1Q5H8C1 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
FREM1Q5H8C1 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC17.98■□□□□ 0.47
FREM1Q5H8C1 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC17.98■□□□□ 0.47
FREM1Q5H8C1 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
FREM1Q5H8C1 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
FREM1Q5H8C1 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
FREM1Q5H8C1 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC17.98■□□□□ 0.47
FREM1Q5H8C1 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
FREM1Q5H8C1 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC17.97■□□□□ 0.47
FREM1Q5H8C1 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
FREM1Q5H8C1 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
FREM1Q5H8C1 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC17.97■□□□□ 0.47
FREM1Q5H8C1 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC17.97■□□□□ 0.47
FREM1Q5H8C1 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
FREM1Q5H8C1 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC17.97■□□□□ 0.47
FREM1Q5H8C1 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
FREM1Q5H8C1 SERP1-205ENST00000487153 657 ntTSL 4 BASIC17.97■□□□□ 0.47
FREM1Q5H8C1 MMAB-206ENST00000540016 945 ntTSL 3 BASIC17.97■□□□□ 0.47
FREM1Q5H8C1 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
FREM1Q5H8C1 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
FREM1Q5H8C1 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC17.97■□□□□ 0.47
FREM1Q5H8C1 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC17.97■□□□□ 0.47
FREM1Q5H8C1 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC17.97■□□□□ 0.47
FREM1Q5H8C1 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
FREM1Q5H8C1 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC17.97■□□□□ 0.47
FREM1Q5H8C1 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
FREM1Q5H8C1 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
FREM1Q5H8C1 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
FREM1Q5H8C1 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC17.97■□□□□ 0.47
FREM1Q5H8C1 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
FREM1Q5H8C1 ME2-216ENST00000639850 2331 ntTSL 5 BASIC17.97■□□□□ 0.47
FREM1Q5H8C1 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
FREM1Q5H8C1 FP700111.2-201ENST00000619190 1892 ntBASIC17.97■□□□□ 0.47
FREM1Q5H8C1 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
FREM1Q5H8C1 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC17.96■□□□□ 0.47
FREM1Q5H8C1 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
FREM1Q5H8C1 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
FREM1Q5H8C1 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
FREM1Q5H8C1 PGM5P4-201ENST00000421970 445 ntBASIC17.96■□□□□ 0.47
FREM1Q5H8C1 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC17.96■□□□□ 0.47
FREM1Q5H8C1 AC066615.1-201ENST00000640911 628 ntBASIC17.96■□□□□ 0.47
FREM1Q5H8C1 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
FREM1Q5H8C1 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
FREM1Q5H8C1 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
FREM1Q5H8C1 PTBP1P-201ENST00000554374 1601 ntBASIC17.96■□□□□ 0.47
FREM1Q5H8C1 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.46
FREM1Q5H8C1 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
FREM1Q5H8C1 BET1L-207ENST00000529614 560 ntTSL 5 BASIC17.96■□□□□ 0.46
FREM1Q5H8C1 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
FREM1Q5H8C1 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
FREM1Q5H8C1 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
FREM1Q5H8C1 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
FREM1Q5H8C1 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
FREM1Q5H8C1 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
FREM1Q5H8C1 KRT8P36-201ENST00000489121 1440 ntBASIC17.95■□□□□ 0.46
FREM1Q5H8C1 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
FREM1Q5H8C1 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
FREM1Q5H8C1 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
FREM1Q5H8C1 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
FREM1Q5H8C1 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms