Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC21.89■■□□□ 1.09
CTC1Q2NKJ3 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
CTC1Q2NKJ3 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC21.88■■□□□ 1.09
CTC1Q2NKJ3 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC21.88■■□□□ 1.09
CTC1Q2NKJ3 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
CTC1Q2NKJ3 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CTC1Q2NKJ3 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CTC1Q2NKJ3 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
CTC1Q2NKJ3 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CTC1Q2NKJ3 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC21.88■■□□□ 1.09
CTC1Q2NKJ3 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC21.88■■□□□ 1.09
CTC1Q2NKJ3 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CTC1Q2NKJ3 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
CTC1Q2NKJ3 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
CTC1Q2NKJ3 AC087742.1-201ENST00000575880 1738 ntBASIC21.88■■□□□ 1.09
CTC1Q2NKJ3 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC21.88■■□□□ 1.09
CTC1Q2NKJ3 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CTC1Q2NKJ3 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CTC1Q2NKJ3 AC026310.3-201ENST00000625186 2373 ntBASIC21.88■■□□□ 1.09
CTC1Q2NKJ3 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
CTC1Q2NKJ3 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
CTC1Q2NKJ3 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC21.87■■□□□ 1.09
CTC1Q2NKJ3 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CTC1Q2NKJ3 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
CTC1Q2NKJ3 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CTC1Q2NKJ3 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
CTC1Q2NKJ3 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC21.87■■□□□ 1.09
CTC1Q2NKJ3 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC21.87■■□□□ 1.09
CTC1Q2NKJ3 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC21.87■■□□□ 1.09
CTC1Q2NKJ3 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
CTC1Q2NKJ3 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CTC1Q2NKJ3 SERF2-207ENST00000409614 582 ntTSL 2 BASIC21.87■■□□□ 1.09
CTC1Q2NKJ3 TSPY15P-201ENST00000457163 923 ntBASIC21.87■■□□□ 1.09
CTC1Q2NKJ3 HES2-205ENST00000487437 968 ntTSL 3 BASIC21.87■■□□□ 1.09
CTC1Q2NKJ3 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
CTC1Q2NKJ3 AP001412.1-201ENST00000608405 714 ntBASIC21.87■■□□□ 1.09
CTC1Q2NKJ3 AC124016.1-201ENST00000609552 612 ntBASIC21.87■■□□□ 1.09
CTC1Q2NKJ3 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CTC1Q2NKJ3 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
CTC1Q2NKJ3 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
CTC1Q2NKJ3 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
CTC1Q2NKJ3 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC21.87■■□□□ 1.09
CTC1Q2NKJ3 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC21.87■■□□□ 1.09
CTC1Q2NKJ3 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
CTC1Q2NKJ3 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CTC1Q2NKJ3 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CTC1Q2NKJ3 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CTC1Q2NKJ3 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
CTC1Q2NKJ3 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CTC1Q2NKJ3 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC21.86■■□□□ 1.09
CTC1Q2NKJ3 DHDH-203ENST00000522614 776 ntTSL 5 BASIC21.86■■□□□ 1.09
CTC1Q2NKJ3 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CTC1Q2NKJ3 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.86■■□□□ 1.09
CTC1Q2NKJ3 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CTC1Q2NKJ3 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
CTC1Q2NKJ3 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
CTC1Q2NKJ3 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
CTC1Q2NKJ3 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC21.86■■□□□ 1.09
CTC1Q2NKJ3 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CTC1Q2NKJ3 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
CTC1Q2NKJ3 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC21.85■■□□□ 1.09
CTC1Q2NKJ3 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CTC1Q2NKJ3 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC21.85■■□□□ 1.09
CTC1Q2NKJ3 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC21.85■■□□□ 1.09
CTC1Q2NKJ3 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CTC1Q2NKJ3 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC21.85■■□□□ 1.09
CTC1Q2NKJ3 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CTC1Q2NKJ3 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CTC1Q2NKJ3 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
CTC1Q2NKJ3 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CTC1Q2NKJ3 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
CTC1Q2NKJ3 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC21.85■■□□□ 1.09
CTC1Q2NKJ3 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CTC1Q2NKJ3 LY6E-205ENST00000519611 635 ntTSL 3 BASIC21.85■■□□□ 1.09
CTC1Q2NKJ3 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC21.85■■□□□ 1.09
CTC1Q2NKJ3 TK2-204ENST00000525974 1178 ntTSL 2 BASIC21.85■■□□□ 1.09
CTC1Q2NKJ3 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC21.85■■□□□ 1.09
CTC1Q2NKJ3 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC21.85■■□□□ 1.09
CTC1Q2NKJ3 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CTC1Q2NKJ3 MIR4785-201ENST00000585005 73 ntBASIC21.85■■□□□ 1.09
CTC1Q2NKJ3 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CTC1Q2NKJ3 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC21.85■■□□□ 1.09
CTC1Q2NKJ3 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CTC1Q2NKJ3 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC21.85■■□□□ 1.09
CTC1Q2NKJ3 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CTC1Q2NKJ3 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CTC1Q2NKJ3 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CTC1Q2NKJ3 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CTC1Q2NKJ3 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
CTC1Q2NKJ3 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CTC1Q2NKJ3 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC21.84■■□□□ 1.09
CTC1Q2NKJ3 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC21.84■■□□□ 1.09
CTC1Q2NKJ3 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CTC1Q2NKJ3 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
CTC1Q2NKJ3 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC21.84■■□□□ 1.09
CTC1Q2NKJ3 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
CTC1Q2NKJ3 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC21.84■■□□□ 1.09
CTC1Q2NKJ3 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC21.84■■□□□ 1.09
CTC1Q2NKJ3 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC21.84■■□□□ 1.09
CTC1Q2NKJ3 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC21.84■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms