Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC23.96■■□□□ 1.43
SHROOM1Q2M3G4 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC23.96■■□□□ 1.43
SHROOM1Q2M3G4 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC23.96■■□□□ 1.43
SHROOM1Q2M3G4 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
SHROOM1Q2M3G4 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
SHROOM1Q2M3G4 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
SHROOM1Q2M3G4 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC23.96■■□□□ 1.43
SHROOM1Q2M3G4 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC23.96■■□□□ 1.43
SHROOM1Q2M3G4 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC23.96■■□□□ 1.43
SHROOM1Q2M3G4 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC23.96■■□□□ 1.43
SHROOM1Q2M3G4 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
SHROOM1Q2M3G4 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
SHROOM1Q2M3G4 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC23.96■■□□□ 1.43
SHROOM1Q2M3G4 TK2-204ENST00000525974 1178 ntTSL 2 BASIC23.96■■□□□ 1.43
SHROOM1Q2M3G4 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
SHROOM1Q2M3G4 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC23.96■■□□□ 1.43
SHROOM1Q2M3G4 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC23.96■■□□□ 1.43
SHROOM1Q2M3G4 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC23.96■■□□□ 1.43
SHROOM1Q2M3G4 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
SHROOM1Q2M3G4 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC23.96■■□□□ 1.43
SHROOM1Q2M3G4 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC23.96■■□□□ 1.43
SHROOM1Q2M3G4 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC23.96■■□□□ 1.43
SHROOM1Q2M3G4 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC23.96■■□□□ 1.43
SHROOM1Q2M3G4 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC23.95■■□□□ 1.43
SHROOM1Q2M3G4 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC23.95■■□□□ 1.42
SHROOM1Q2M3G4 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC23.95■■□□□ 1.42
SHROOM1Q2M3G4 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
SHROOM1Q2M3G4 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
SHROOM1Q2M3G4 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
SHROOM1Q2M3G4 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC23.95■■□□□ 1.42
SHROOM1Q2M3G4 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
SHROOM1Q2M3G4 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
SHROOM1Q2M3G4 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC23.95■■□□□ 1.42
SHROOM1Q2M3G4 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
SHROOM1Q2M3G4 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
SHROOM1Q2M3G4 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
SHROOM1Q2M3G4 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
SHROOM1Q2M3G4 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC23.94■■□□□ 1.42
SHROOM1Q2M3G4 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC23.94■■□□□ 1.42
SHROOM1Q2M3G4 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC23.94■■□□□ 1.42
SHROOM1Q2M3G4 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
SHROOM1Q2M3G4 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
SHROOM1Q2M3G4 AC011484.1-201ENST00000377652 1995 ntBASIC23.94■■□□□ 1.42
SHROOM1Q2M3G4 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
SHROOM1Q2M3G4 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC23.94■■□□□ 1.42
SHROOM1Q2M3G4 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
SHROOM1Q2M3G4 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC23.94■■□□□ 1.42
SHROOM1Q2M3G4 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
SHROOM1Q2M3G4 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
SHROOM1Q2M3G4 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
SHROOM1Q2M3G4 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
SHROOM1Q2M3G4 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
SHROOM1Q2M3G4 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
SHROOM1Q2M3G4 SERF2-207ENST00000409614 582 ntTSL 2 BASIC23.93■■□□□ 1.42
SHROOM1Q2M3G4 AC005829.2-201ENST00000571422 1056 ntBASIC23.93■■□□□ 1.42
SHROOM1Q2M3G4 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
SHROOM1Q2M3G4 MTDHP1-201ENST00000605323 784 ntBASIC23.93■■□□□ 1.42
SHROOM1Q2M3G4 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC23.93■■□□□ 1.42
SHROOM1Q2M3G4 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
SHROOM1Q2M3G4 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC23.93■■□□□ 1.42
SHROOM1Q2M3G4 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC23.93■■□□□ 1.42
SHROOM1Q2M3G4 AF106564.1-201ENST00000607058 2553 ntBASIC23.93■■□□□ 1.42
SHROOM1Q2M3G4 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
SHROOM1Q2M3G4 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
SHROOM1Q2M3G4 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
SHROOM1Q2M3G4 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
SHROOM1Q2M3G4 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC23.92■■□□□ 1.42
SHROOM1Q2M3G4 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
SHROOM1Q2M3G4 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
SHROOM1Q2M3G4 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC23.92■■□□□ 1.42
SHROOM1Q2M3G4 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
SHROOM1Q2M3G4 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC23.92■■□□□ 1.42
SHROOM1Q2M3G4 PARN-205ENST00000539279 1557 ntTSL 2 BASIC23.92■■□□□ 1.42
SHROOM1Q2M3G4 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
SHROOM1Q2M3G4 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
SHROOM1Q2M3G4 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC23.92■■□□□ 1.42
SHROOM1Q2M3G4 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
SHROOM1Q2M3G4 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC23.92■■□□□ 1.42
SHROOM1Q2M3G4 GGT1-206ENST00000404223 952 ntTSL 2 BASIC23.92■■□□□ 1.42
SHROOM1Q2M3G4 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC23.92■■□□□ 1.42
SHROOM1Q2M3G4 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC23.92■■□□□ 1.42
SHROOM1Q2M3G4 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC23.92■■□□□ 1.42
SHROOM1Q2M3G4 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
SHROOM1Q2M3G4 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC23.92■■□□□ 1.42
SHROOM1Q2M3G4 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
SHROOM1Q2M3G4 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
SHROOM1Q2M3G4 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC23.92■■□□□ 1.42
SHROOM1Q2M3G4 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC23.92■■□□□ 1.42
SHROOM1Q2M3G4 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC23.92■■□□□ 1.42
SHROOM1Q2M3G4 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC23.92■■□□□ 1.42
SHROOM1Q2M3G4 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
SHROOM1Q2M3G4 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
SHROOM1Q2M3G4 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC23.92■■□□□ 1.42
SHROOM1Q2M3G4 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC23.92■■□□□ 1.42
SHROOM1Q2M3G4 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
SHROOM1Q2M3G4 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC23.91■■□□□ 1.42
SHROOM1Q2M3G4 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
SHROOM1Q2M3G4 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC23.91■■□□□ 1.42
SHROOM1Q2M3G4 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
SHROOM1Q2M3G4 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms