Protein–RNA interactions for Protein: Q15428

SF3A2, Splicing factor 3A subunit 2, humanhuman

Known RBP Predictions only

Length 464 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2Q15428 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.26■□□□□ 0.83
SF3A2Q15428 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SF3A2Q15428 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SF3A2Q15428 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.25■□□□□ 0.83
SF3A2Q15428 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.25■□□□□ 0.83
SF3A2Q15428 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
SF3A2Q15428 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC20.25■□□□□ 0.83
SF3A2Q15428 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC20.25■□□□□ 0.83
SF3A2Q15428 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC20.25■□□□□ 0.83
SF3A2Q15428 AP003071.4-201ENST00000562276 1284 ntBASIC20.25■□□□□ 0.83
SF3A2Q15428 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SF3A2Q15428 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.25■□□□□ 0.83
SF3A2Q15428 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
SF3A2Q15428 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SF3A2Q15428 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.25■□□□□ 0.83
SF3A2Q15428 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SF3A2Q15428 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SF3A2Q15428 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
SF3A2Q15428 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
SF3A2Q15428 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.24■□□□□ 0.83
SF3A2Q15428 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC20.24■□□□□ 0.83
SF3A2Q15428 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC20.24■□□□□ 0.83
SF3A2Q15428 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SF3A2Q15428 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SF3A2Q15428 MMP23A-201ENST00000234610 1017 ntBASIC20.24■□□□□ 0.83
SF3A2Q15428 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
SF3A2Q15428 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC20.24■□□□□ 0.83
SF3A2Q15428 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC20.24■□□□□ 0.83
SF3A2Q15428 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC20.24■□□□□ 0.83
SF3A2Q15428 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SF3A2Q15428 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC20.24■□□□□ 0.83
SF3A2Q15428 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SF3A2Q15428 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SF3A2Q15428 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SF3A2Q15428 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SF3A2Q15428 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SF3A2Q15428 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
SF3A2Q15428 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SF3A2Q15428 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
SF3A2Q15428 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SF3A2Q15428 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
SF3A2Q15428 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
SF3A2Q15428 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC20.23■□□□□ 0.83
SF3A2Q15428 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
SF3A2Q15428 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC20.23■□□□□ 0.83
SF3A2Q15428 AC092865.7-201ENST00000641832 219 ntBASIC20.23■□□□□ 0.83
SF3A2Q15428 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
SF3A2Q15428 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SF3A2Q15428 AL024507.2-201ENST00000606070 2574 ntBASIC20.23■□□□□ 0.83
SF3A2Q15428 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20.22■□□□□ 0.83
SF3A2Q15428 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SF3A2Q15428 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SF3A2Q15428 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SF3A2Q15428 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SF3A2Q15428 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
SF3A2Q15428 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
SF3A2Q15428 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC20.22■□□□□ 0.83
SF3A2Q15428 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC20.22■□□□□ 0.83
SF3A2Q15428 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
SF3A2Q15428 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC20.22■□□□□ 0.83
SF3A2Q15428 RMI2-205ENST00000576027 818 ntTSL 2 BASIC20.22■□□□□ 0.83
SF3A2Q15428 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
SF3A2Q15428 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
SF3A2Q15428 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SF3A2Q15428 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SF3A2Q15428 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.22■□□□□ 0.83
SF3A2Q15428 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
SF3A2Q15428 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.22■□□□□ 0.83
SF3A2Q15428 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC20.21■□□□□ 0.83
SF3A2Q15428 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SF3A2Q15428 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SF3A2Q15428 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.21■□□□□ 0.83
SF3A2Q15428 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SF3A2Q15428 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SF3A2Q15428 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SF3A2Q15428 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SF3A2Q15428 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SF3A2Q15428 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
SF3A2Q15428 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
SF3A2Q15428 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
SF3A2Q15428 TPM1-226ENST00000560959 925 ntTSL 2 BASIC20.21■□□□□ 0.83
SF3A2Q15428 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC20.21■□□□□ 0.83
SF3A2Q15428 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SF3A2Q15428 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC20.21■□□□□ 0.83
SF3A2Q15428 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
SF3A2Q15428 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC20.21■□□□□ 0.83
SF3A2Q15428 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SF3A2Q15428 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SF3A2Q15428 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SF3A2Q15428 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SF3A2Q15428 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SF3A2Q15428 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
SF3A2Q15428 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SF3A2Q15428 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SF3A2Q15428 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.83
SF3A2Q15428 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SF3A2Q15428 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC20.2■□□□□ 0.82
SF3A2Q15428 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SF3A2Q15428 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SF3A2Q15428 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms