Protein–RNA interactions for Protein: Q02260

SMD1, Small nuclear ribonucleoprotein Sm D1, yeastyeast

Predicted RBP Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SMD1Q02260 YMR045CYMR045C 5268 nt1.7□□□□□ -2.14
SMD1Q02260 RVS161YCR009C 798 nt1.7□□□□□ -2.14
SMD1Q02260 SDC1YDR469W 528 nt1.7□□□□□ -2.14
SMD1Q02260 YFR056CYFR056C 369 nt1.7□□□□□ -2.14
SMD1Q02260 tW(CCA)G1tW(CCA)G1 72 nt1.7□□□□□ -2.14
SMD1Q02260 tW(CCA)G2tW(CCA)G2 72 nt1.7□□□□□ -2.14
SMD1Q02260 tW(CCA)JtW(CCA)J 72 nt1.7□□□□□ -2.14
SMD1Q02260 tW(CCA)KtW(CCA)K 72 nt1.7□□□□□ -2.14
SMD1Q02260 tW(CCA)MtW(CCA)M 72 nt1.7□□□□□ -2.14
SMD1Q02260 tW(CCA)PtW(CCA)P 72 nt1.7□□□□□ -2.14
SMD1Q02260 SPE1YKL184W 1401 nt1.7□□□□□ -2.14
SMD1Q02260 BET3YKR068C 582 nt1.7□□□□□ -2.14
SMD1Q02260 PAU8YAL068C 363 nt1.7□□□□□ -2.14
SMD1Q02260 PAU20YOL161C 363 nt1.7□□□□□ -2.14
SMD1Q02260 YOR050CYOR050C 348 nt1.7□□□□□ -2.14
SMD1Q02260 PTC5YOR090C 1719 nt1.7□□□□□ -2.14
SMD1Q02260 COS111YBR203W 2775 nt1.7□□□□□ -2.14
SMD1Q02260 NUP82YJL061W 2142 nt1.7□□□□□ -2.14
SMD1Q02260 TAE2YPL009C 3117 nt1.7□□□□□ -2.14
SMD1Q02260 NCL1YBL024W 2055 nt1.7□□□□□ -2.14
SMD1Q02260 NUP100YKL068W 2880 nt1.69□□□□□ -2.14
SMD1Q02260 YOR192C-AYOR192C-A 1317 nt1.69□□□□□ -2.14
SMD1Q02260 GIS1YDR096W 2685 nt1.69□□□□□ -2.14
SMD1Q02260 YEL018C-AYEL018C-A 534 nt1.69□□□□□ -2.14
SMD1Q02260 MXR1YER042W 555 nt1.69□□□□□ -2.14
SMD1Q02260 BIG1YHR101C 1008 nt1.69□□□□□ -2.14
SMD1Q02260 YHR130CYHR130C 336 nt1.69□□□□□ -2.14
SMD1Q02260 RPI1YIL119C 1224 nt1.69□□□□□ -2.14
SMD1Q02260 NCE101YJL205C 162 nt1.69□□□□□ -2.14
SMD1Q02260 AIM32YML050W 936 nt1.69□□□□□ -2.14
SMD1Q02260 TOM22YNL131W 459 nt1.69□□□□□ -2.14
SMD1Q02260 YOR032W-AYOR032W-A 201 nt1.69□□□□□ -2.14
SMD1Q02260 YOL098CYOL098C 3114 nt1.69□□□□□ -2.14
SMD1Q02260 SHE9YDR393W 1371 nt1.69□□□□□ -2.14
SMD1Q02260 YEL043WYEL043W 2871 nt1.69□□□□□ -2.14
SMD1Q02260 BFA1YJR053W 1725 nt1.69□□□□□ -2.14
SMD1Q02260 OSW7YFR039C 1533 nt1.68□□□□□ -2.14
SMD1Q02260 ELG1YOR144C 2376 nt1.68□□□□□ -2.14
SMD1Q02260 YDL068WYDL068W 330 nt1.68□□□□□ -2.14
SMD1Q02260 FMP16YDR070C 282 nt1.68□□□□□ -2.14
SMD1Q02260 IRC19YLL033W 693 nt1.68□□□□□ -2.14
SMD1Q02260 RPS17AYML024W 411 nt1.68□□□□□ -2.14
SMD1Q02260 SPC29YPL124W 762 nt1.68□□□□□ -2.14
SMD1Q02260 MCD1YDL003W 1701 nt1.68□□□□□ -2.14
SMD1Q02260 SCP160YJL080C 3669 nt1.68□□□□□ -2.14
SMD1Q02260 MSL5YLR116W 1431 nt1.67□□□□□ -2.14
SMD1Q02260 SNX41YDR425W 1878 nt1.67□□□□□ -2.14
SMD1Q02260 MPH1YIR002C 2982 nt1.67□□□□□ -2.14
SMD1Q02260 STE11YLR362W 2154 nt1.67□□□□□ -2.14
SMD1Q02260 MZM1YDR493W 372 nt1.67□□□□□ -2.14
SMD1Q02260 CAJ1YER048C 1176 nt1.67□□□□□ -2.14
SMD1Q02260 BI2Q0110 1272 nt1.67□□□□□ -2.14
SMD1Q02260 RRF1YHR038W 693 nt1.67□□□□□ -2.14
SMD1Q02260 SNC1YAL030W 354 nt1.67□□□□□ -2.14
SMD1Q02260 AIM29YKR074W 468 nt1.67□□□□□ -2.14
SMD1Q02260 COA4YLR218C 453 nt1.67□□□□□ -2.14
SMD1Q02260 COX7YMR256C 183 nt1.67□□□□□ -2.14
SMD1Q02260 YPL276WYPL276W 438 nt1.67□□□□□ -2.14
SMD1Q02260 MUD2YKL074C 1584 nt1.67□□□□□ -2.14
SMD1Q02260 RNH70YGR276C 1662 nt1.67□□□□□ -2.14
SMD1Q02260 YJL016WYJL016W 1686 nt1.67□□□□□ -2.14
SMD1Q02260 PDR1YGL013C 3207 nt1.66□□□□□ -2.14
SMD1Q02260 YCR001WYCR001W 315 nt1.66□□□□□ -2.14
SMD1Q02260 YCR064CYCR064C 411 nt1.66□□□□□ -2.14
SMD1Q02260 YDR193WYDR193W 399 nt1.66□□□□□ -2.14
SMD1Q02260 RPL27BYDR471W 411 nt1.66□□□□□ -2.14
SMD1Q02260 NOP10YHR072W-A 177 nt1.66□□□□□ -2.14
SMD1Q02260 YLR171WYLR171W 390 nt1.66□□□□□ -2.14
SMD1Q02260 YML108WYML108W 318 nt1.66□□□□□ -2.14
SMD1Q02260 SEN15YMR059W 387 nt1.66□□□□□ -2.14
SMD1Q02260 YNL010WYNL010W 726 nt1.66□□□□□ -2.14
SMD1Q02260 snR41snR41 95 nt1.66□□□□□ -2.14
SMD1Q02260 ASM4YDL088C 1587 nt1.66□□□□□ -2.14
SMD1Q02260 CHC1YGL206C 4962 nt1.66□□□□□ -2.14
SMD1Q02260 SCD5YOR329C 2619 nt1.66□□□□□ -2.14
SMD1Q02260 NAN1YPL126W 2691 nt1.65□□□□□ -2.14
SMD1Q02260 IPT1YDR072C 1584 nt1.65□□□□□ -2.15
SMD1Q02260 CDC50YCR094W 1176 nt1.65□□□□□ -2.15
SMD1Q02260 YDR509WYDR509W 348 nt1.65□□□□□ -2.15
SMD1Q02260 YER188C-AYER188C-A 300 nt1.65□□□□□ -2.15
SMD1Q02260 YHR032W-AYHR032W-A 180 nt1.65□□□□□ -2.15
SMD1Q02260 tT(UGU)Q1tT(UGU)Q1 76 nt1.65□□□□□ -2.15
SMD1Q02260 AYR1YIL124W 894 nt1.65□□□□□ -2.15
SMD1Q02260 SYM1YLR251W 594 nt1.65□□□□□ -2.15
SMD1Q02260 YLR269CYLR269C 351 nt1.65□□□□□ -2.15
SMD1Q02260 SIP18YMR175W 240 nt1.65□□□□□ -2.15
SMD1Q02260 YMR324CYMR324C 243 nt1.65□□□□□ -2.15
SMD1Q02260 PPN1YDR452W 2025 nt1.65□□□□□ -2.15
SMD1Q02260 YOR296WYOR296W 3870 nt1.65□□□□□ -2.15
SMD1Q02260 PTP3YER075C 2787 nt1.64□□□□□ -2.15
SMD1Q02260 VPS52YDR484W 1926 nt1.64□□□□□ -2.15
SMD1Q02260 KOG1YHR186C 4674 nt1.64□□□□□ -2.15
SMD1Q02260 CLN3YAL040C 1743 nt1.64□□□□□ -2.15
SMD1Q02260 YJR157WYJR157W 363 nt1.64□□□□□ -2.15
SMD1Q02260 GRX8YLR364W 330 nt1.64□□□□□ -2.15
SMD1Q02260 VTI1YMR197C 654 nt1.64□□□□□ -2.15
SMD1Q02260 YOR248WYOR248W 303 nt1.64□□□□□ -2.15
SMD1Q02260 RSA1YPL193W 1146 nt1.64□□□□□ -2.15
SMD1Q02260 ROX1YPR065W 1107 nt1.64□□□□□ -2.15
SMD1Q02260 SLM6YBR266C 453 nt1.64□□□□□ -2.15
Retrieved 100 of 7,029 protein–RNA pairs in 16.3 ms