Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC17.78■□□□□ 0.44
SEC61A1P61619 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC17.78■□□□□ 0.44
SEC61A1P61619 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC17.78■□□□□ 0.44
SEC61A1P61619 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC17.78■□□□□ 0.44
SEC61A1P61619 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SEC61A1P61619 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC17.78■□□□□ 0.44
SEC61A1P61619 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC17.78■□□□□ 0.44
SEC61A1P61619 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SEC61A1P61619 MFF-203ENST00000349901 1716 ntTSL 2 BASIC17.78■□□□□ 0.44
SEC61A1P61619 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SEC61A1P61619 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SEC61A1P61619 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SEC61A1P61619 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
SEC61A1P61619 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
SEC61A1P61619 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
SEC61A1P61619 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.44
SEC61A1P61619 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SEC61A1P61619 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SEC61A1P61619 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SEC61A1P61619 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
SEC61A1P61619 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SEC61A1P61619 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SEC61A1P61619 KRT19P1-201ENST00000405746 1186 ntBASIC17.77■□□□□ 0.44
SEC61A1P61619 AC016769.1-201ENST00000409132 1010 ntBASIC17.77■□□□□ 0.44
SEC61A1P61619 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SEC61A1P61619 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
SEC61A1P61619 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SEC61A1P61619 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SEC61A1P61619 AC090192.1-201ENST00000517740 490 ntBASIC17.77■□□□□ 0.44
SEC61A1P61619 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC17.77■□□□□ 0.44
SEC61A1P61619 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC17.77■□□□□ 0.44
SEC61A1P61619 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SEC61A1P61619 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC17.77■□□□□ 0.44
SEC61A1P61619 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC17.77■□□□□ 0.44
SEC61A1P61619 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC17.77■□□□□ 0.43
SEC61A1P61619 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
SEC61A1P61619 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC17.77■□□□□ 0.43
SEC61A1P61619 AP006587.3-201ENST00000525742 1516 ntBASIC17.77■□□□□ 0.43
SEC61A1P61619 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SEC61A1P61619 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
SEC61A1P61619 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
SEC61A1P61619 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC17.77■□□□□ 0.43
SEC61A1P61619 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SEC61A1P61619 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SEC61A1P61619 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SEC61A1P61619 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
SEC61A1P61619 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
SEC61A1P61619 ME2-218ENST00000640965 2476 ntTSL 5 BASIC17.76■□□□□ 0.43
SEC61A1P61619 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SEC61A1P61619 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SEC61A1P61619 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC17.76■□□□□ 0.43
SEC61A1P61619 AC006015.1-201ENST00000429970 570 ntBASIC17.76■□□□□ 0.43
SEC61A1P61619 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SEC61A1P61619 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SEC61A1P61619 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC17.76■□□□□ 0.43
SEC61A1P61619 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC17.76■□□□□ 0.43
SEC61A1P61619 AL034346.1-201ENST00000568244 1277 ntBASIC17.76■□□□□ 0.43
SEC61A1P61619 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC17.76■□□□□ 0.43
SEC61A1P61619 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
SEC61A1P61619 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC17.76■□□□□ 0.43
SEC61A1P61619 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SEC61A1P61619 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SEC61A1P61619 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC17.76■□□□□ 0.43
SEC61A1P61619 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SEC61A1P61619 MFF-207ENST00000409565 1548 ntTSL 2 BASIC17.76■□□□□ 0.43
SEC61A1P61619 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC17.76■□□□□ 0.43
SEC61A1P61619 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SEC61A1P61619 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
SEC61A1P61619 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SEC61A1P61619 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SEC61A1P61619 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SEC61A1P61619 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SEC61A1P61619 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
SEC61A1P61619 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
SEC61A1P61619 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SEC61A1P61619 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
SEC61A1P61619 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SEC61A1P61619 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
SEC61A1P61619 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SEC61A1P61619 HSCB-202ENST00000398941 955 ntTSL 2 BASIC17.75■□□□□ 0.43
SEC61A1P61619 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC17.75■□□□□ 0.43
SEC61A1P61619 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SEC61A1P61619 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SEC61A1P61619 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SEC61A1P61619 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SEC61A1P61619 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SEC61A1P61619 PCDHAC2-203ENST00000615316 3011 ntBASIC17.75■□□□□ 0.43
SEC61A1P61619 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC17.75■□□□□ 0.43
SEC61A1P61619 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SEC61A1P61619 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC17.75■□□□□ 0.43
SEC61A1P61619 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SEC61A1P61619 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SEC61A1P61619 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC17.75■□□□□ 0.43
SEC61A1P61619 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC17.74■□□□□ 0.43
SEC61A1P61619 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SEC61A1P61619 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SEC61A1P61619 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SEC61A1P61619 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
SEC61A1P61619 DYM-203ENST00000442713 2147 ntTSL 2 BASIC17.74■□□□□ 0.43
SEC61A1P61619 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 119.8 ms