Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
AP3S2P59780 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
AP3S2P59780 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC17.52■□□□□ 0.4
AP3S2P59780 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC17.52■□□□□ 0.4
AP3S2P59780 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
AP3S2P59780 CD72-202ENST00000378430 585 ntTSL 3 BASIC17.52■□□□□ 0.4
AP3S2P59780 ATP5G2P3-201ENST00000429083 425 ntBASIC17.52■□□□□ 0.4
AP3S2P59780 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC17.52■□□□□ 0.4
AP3S2P59780 MTDHP2-201ENST00000601468 714 ntBASIC17.52■□□□□ 0.4
AP3S2P59780 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC17.52■□□□□ 0.4
AP3S2P59780 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
AP3S2P59780 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
AP3S2P59780 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
AP3S2P59780 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC17.52■□□□□ 0.4
AP3S2P59780 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
AP3S2P59780 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
AP3S2P59780 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
AP3S2P59780 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
AP3S2P59780 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
AP3S2P59780 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
AP3S2P59780 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
AP3S2P59780 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
AP3S2P59780 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
AP3S2P59780 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
AP3S2P59780 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC17.51■□□□□ 0.39
AP3S2P59780 AC103724.3-201ENST00000564481 992 ntBASIC17.51■□□□□ 0.39
AP3S2P59780 AL117332.1-201ENST00000622628 974 ntBASIC17.51■□□□□ 0.39
AP3S2P59780 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
AP3S2P59780 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC17.51■□□□□ 0.39
AP3S2P59780 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
AP3S2P59780 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.51■□□□□ 0.39
AP3S2P59780 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
AP3S2P59780 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
AP3S2P59780 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
AP3S2P59780 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
AP3S2P59780 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
AP3S2P59780 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
AP3S2P59780 AC011484.1-201ENST00000377652 1995 ntBASIC17.5■□□□□ 0.39
AP3S2P59780 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
AP3S2P59780 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
AP3S2P59780 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
AP3S2P59780 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC17.5■□□□□ 0.39
AP3S2P59780 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC17.5■□□□□ 0.39
AP3S2P59780 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
AP3S2P59780 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
AP3S2P59780 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
AP3S2P59780 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC17.5■□□□□ 0.39
AP3S2P59780 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
AP3S2P59780 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
AP3S2P59780 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
AP3S2P59780 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
AP3S2P59780 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
AP3S2P59780 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
AP3S2P59780 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
AP3S2P59780 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
AP3S2P59780 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC17.5■□□□□ 0.39
AP3S2P59780 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
AP3S2P59780 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
AP3S2P59780 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
AP3S2P59780 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC17.49■□□□□ 0.39
AP3S2P59780 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
AP3S2P59780 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
AP3S2P59780 AL158211.5-201ENST00000623583 2518 ntBASIC17.49■□□□□ 0.39
AP3S2P59780 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
AP3S2P59780 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
AP3S2P59780 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
AP3S2P59780 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
AP3S2P59780 MBP-237ENST00000579129 1052 ntTSL 5 BASIC17.49■□□□□ 0.39
AP3S2P59780 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
AP3S2P59780 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC17.49■□□□□ 0.39
AP3S2P59780 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC17.49■□□□□ 0.39
AP3S2P59780 AC020763.4-201ENST00000623414 4170 ntBASIC17.49■□□□□ 0.39
AP3S2P59780 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.49■□□□□ 0.39
AP3S2P59780 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
AP3S2P59780 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC17.49■□□□□ 0.39
AP3S2P59780 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
AP3S2P59780 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
AP3S2P59780 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
AP3S2P59780 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
AP3S2P59780 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
AP3S2P59780 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
AP3S2P59780 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC17.49■□□□□ 0.39
AP3S2P59780 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC17.49■□□□□ 0.39
AP3S2P59780 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
AP3S2P59780 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
AP3S2P59780 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
AP3S2P59780 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
AP3S2P59780 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
AP3S2P59780 AC004987.1-201ENST00000428627 508 ntBASIC17.48■□□□□ 0.39
AP3S2P59780 NTF6A-201ENST00000591175 560 ntBASIC17.48■□□□□ 0.39
AP3S2P59780 AC092028.1-203ENST00000608262 953 ntBASIC17.48■□□□□ 0.39
AP3S2P59780 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
AP3S2P59780 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
AP3S2P59780 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
AP3S2P59780 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
AP3S2P59780 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
AP3S2P59780 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
AP3S2P59780 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
AP3S2P59780 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
AP3S2P59780 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms