Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
PER3P56645 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC18.82■□□□□ 0.6
PER3P56645 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
PER3P56645 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PER3P56645 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
PER3P56645 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PER3P56645 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.82■□□□□ 0.6
PER3P56645 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
PER3P56645 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PER3P56645 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
PER3P56645 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
PER3P56645 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PER3P56645 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PER3P56645 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC18.81■□□□□ 0.6
PER3P56645 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC18.81■□□□□ 0.6
PER3P56645 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PER3P56645 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
PER3P56645 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PER3P56645 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PER3P56645 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PER3P56645 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC18.81■□□□□ 0.6
PER3P56645 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PER3P56645 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC18.81■□□□□ 0.6
PER3P56645 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PER3P56645 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC18.81■□□□□ 0.6
PER3P56645 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PER3P56645 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC18.81■□□□□ 0.6
PER3P56645 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PER3P56645 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PER3P56645 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PER3P56645 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PER3P56645 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PER3P56645 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC18.8■□□□□ 0.6
PER3P56645 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC18.8■□□□□ 0.6
PER3P56645 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC18.8■□□□□ 0.6
PER3P56645 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PER3P56645 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PER3P56645 AC092053.2-201ENST00000640557 1818 ntBASIC18.8■□□□□ 0.6
PER3P56645 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PER3P56645 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
PER3P56645 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC18.8■□□□□ 0.6
PER3P56645 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC18.8■□□□□ 0.6
PER3P56645 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC18.8■□□□□ 0.6
PER3P56645 RNF146-206ENST00000480444 843 ntTSL 2 BASIC18.8■□□□□ 0.6
PER3P56645 AC008550.1-201ENST00000511500 884 ntBASIC18.8■□□□□ 0.6
PER3P56645 UNC93B5-201ENST00000530315 699 ntBASIC18.8■□□□□ 0.6
PER3P56645 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
PER3P56645 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC18.8■□□□□ 0.6
PER3P56645 USP36-216ENST00000589424 970 ntTSL 5 BASIC18.8■□□□□ 0.6
PER3P56645 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC18.8■□□□□ 0.6
PER3P56645 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PER3P56645 AC010980.2-201ENST00000587099 1412 ntBASIC18.8■□□□□ 0.6
PER3P56645 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PER3P56645 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
PER3P56645 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC18.8■□□□□ 0.6
PER3P56645 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PER3P56645 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PER3P56645 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PER3P56645 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
PER3P56645 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
PER3P56645 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PER3P56645 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
PER3P56645 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC18.79■□□□□ 0.6
PER3P56645 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC18.79■□□□□ 0.6
PER3P56645 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PER3P56645 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PER3P56645 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC18.79■□□□□ 0.6
PER3P56645 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
PER3P56645 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
PER3P56645 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PER3P56645 LSM12P1-201ENST00000411836 588 ntBASIC18.79■□□□□ 0.6
PER3P56645 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PER3P56645 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
PER3P56645 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC18.79■□□□□ 0.6
PER3P56645 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
PER3P56645 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PER3P56645 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
PER3P56645 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PER3P56645 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PER3P56645 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
PER3P56645 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
PER3P56645 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PER3P56645 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC18.78■□□□□ 0.6
PER3P56645 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PER3P56645 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PER3P56645 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
PER3P56645 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PER3P56645 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PER3P56645 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
PER3P56645 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PER3P56645 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PER3P56645 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PER3P56645 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PER3P56645 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PER3P56645 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC18.78■□□□□ 0.6
PER3P56645 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PER3P56645 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PER3P56645 AC073648.6-201ENST00000641589 218 ntBASIC18.78■□□□□ 0.6
PER3P56645 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PER3P56645 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 170 ms