Protein–RNA interactions for Protein: P54829

PTPN5, Tyrosine-protein phosphatase non-receptor type 5, humanhuman

Predictions only

Length 565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN5P54829 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PTPN5P54829 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC21.14■□□□□ 0.97
PTPN5P54829 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PTPN5P54829 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
PTPN5P54829 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
PTPN5P54829 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PTPN5P54829 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PTPN5P54829 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC21.13■□□□□ 0.97
PTPN5P54829 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC21.13■□□□□ 0.97
PTPN5P54829 TK2-204ENST00000525974 1178 ntTSL 2 BASIC21.13■□□□□ 0.97
PTPN5P54829 AL353708.3-201ENST00000610272 989 ntBASIC21.13■□□□□ 0.97
PTPN5P54829 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PTPN5P54829 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
PTPN5P54829 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
PTPN5P54829 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC21.13■□□□□ 0.97
PTPN5P54829 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
PTPN5P54829 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PTPN5P54829 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC21.12■□□□□ 0.97
PTPN5P54829 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC21.12■□□□□ 0.97
PTPN5P54829 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PTPN5P54829 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PTPN5P54829 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PTPN5P54829 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PTPN5P54829 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.12■□□□□ 0.97
PTPN5P54829 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
PTPN5P54829 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
PTPN5P54829 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC21.12■□□□□ 0.97
PTPN5P54829 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC21.12■□□□□ 0.97
PTPN5P54829 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC21.12■□□□□ 0.97
PTPN5P54829 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PTPN5P54829 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC21.12■□□□□ 0.97
PTPN5P54829 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PTPN5P54829 AL589743.5-201ENST00000616611 1050 ntBASIC21.12■□□□□ 0.97
PTPN5P54829 AC005363.2-201ENST00000618631 242 ntBASIC21.12■□□□□ 0.97
PTPN5P54829 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PTPN5P54829 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PTPN5P54829 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PTPN5P54829 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PTPN5P54829 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PTPN5P54829 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC21.11■□□□□ 0.97
PTPN5P54829 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
PTPN5P54829 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PTPN5P54829 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PTPN5P54829 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PTPN5P54829 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC21.11■□□□□ 0.97
PTPN5P54829 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PTPN5P54829 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC21.11■□□□□ 0.97
PTPN5P54829 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC21.11■□□□□ 0.97
PTPN5P54829 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC21.11■□□□□ 0.97
PTPN5P54829 AC133681.1-201ENST00000465482 601 ntBASIC21.11■□□□□ 0.97
PTPN5P54829 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
PTPN5P54829 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PTPN5P54829 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC21.11■□□□□ 0.97
PTPN5P54829 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PTPN5P54829 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PTPN5P54829 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PTPN5P54829 LINC00565-201ENST00000562710 2331 ntBASIC21.11■□□□□ 0.97
PTPN5P54829 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC21.11■□□□□ 0.97
PTPN5P54829 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
PTPN5P54829 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC21.1■□□□□ 0.97
PTPN5P54829 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PTPN5P54829 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC21.1■□□□□ 0.97
PTPN5P54829 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
PTPN5P54829 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.1■□□□□ 0.97
PTPN5P54829 MMP23A-201ENST00000234610 1017 ntBASIC21.1■□□□□ 0.97
PTPN5P54829 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC21.1■□□□□ 0.97
PTPN5P54829 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PTPN5P54829 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC21.1■□□□□ 0.97
PTPN5P54829 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC21.1■□□□□ 0.97
PTPN5P54829 SLC29A4P2-201ENST00000504749 1089 ntBASIC21.1■□□□□ 0.97
PTPN5P54829 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
PTPN5P54829 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PTPN5P54829 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
PTPN5P54829 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PTPN5P54829 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PTPN5P54829 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
PTPN5P54829 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.09■□□□□ 0.97
PTPN5P54829 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
PTPN5P54829 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PTPN5P54829 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
PTPN5P54829 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PTPN5P54829 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PTPN5P54829 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
PTPN5P54829 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PTPN5P54829 LY6E-205ENST00000519611 635 ntTSL 3 BASIC21.09■□□□□ 0.97
PTPN5P54829 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC21.09■□□□□ 0.97
PTPN5P54829 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC21.09■□□□□ 0.97
PTPN5P54829 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC21.09■□□□□ 0.97
PTPN5P54829 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC21.09■□□□□ 0.97
PTPN5P54829 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC21.09■□□□□ 0.97
PTPN5P54829 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PTPN5P54829 AC124016.1-201ENST00000609552 612 ntBASIC21.09■□□□□ 0.97
PTPN5P54829 AC100791.3-201ENST00000617619 330 ntBASIC21.09■□□□□ 0.97
PTPN5P54829 KRT16P2-201ENST00000414673 1423 ntBASIC21.09■□□□□ 0.97
PTPN5P54829 MFF-203ENST00000349901 1716 ntTSL 2 BASIC21.09■□□□□ 0.97
PTPN5P54829 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PTPN5P54829 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PTPN5P54829 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PTPN5P54829 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC21.08■□□□□ 0.97
PTPN5P54829 MFF-205ENST00000354503 1085 ntTSL 2 BASIC21.08■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms