Protein–RNA interactions for Protein: P54727

RAD23B, UV excision repair protein RAD23 homolog B, humanhuman

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD23BP54727 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC21.81■■□□□ 1.08
RAD23BP54727 AC083906.2-201ENST00000511578 360 ntBASIC21.81■■□□□ 1.08
RAD23BP54727 AF201337.1-201ENST00000520239 748 ntBASIC21.81■■□□□ 1.08
RAD23BP54727 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
RAD23BP54727 AC105036.2-201ENST00000569468 176 ntBASIC21.81■■□□□ 1.08
RAD23BP54727 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC21.81■■□□□ 1.08
RAD23BP54727 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC21.81■■□□□ 1.08
RAD23BP54727 GXYLT1P5-201ENST00000614548 1189 ntBASIC21.81■■□□□ 1.08
RAD23BP54727 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC21.81■■□□□ 1.08
RAD23BP54727 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
RAD23BP54727 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
RAD23BP54727 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC21.81■■□□□ 1.08
RAD23BP54727 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC21.81■■□□□ 1.08
RAD23BP54727 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC21.81■■□□□ 1.08
RAD23BP54727 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
RAD23BP54727 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RAD23BP54727 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
RAD23BP54727 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RAD23BP54727 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
RAD23BP54727 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
RAD23BP54727 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
RAD23BP54727 FP700111.2-201ENST00000619190 1892 ntBASIC21.8■■□□□ 1.08
RAD23BP54727 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RAD23BP54727 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC21.8■■□□□ 1.08
RAD23BP54727 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
RAD23BP54727 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RAD23BP54727 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC21.8■■□□□ 1.08
RAD23BP54727 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC21.8■■□□□ 1.08
RAD23BP54727 AL121832.2-201ENST00000610979 668 ntBASIC21.8■■□□□ 1.08
RAD23BP54727 WT1-AS_3.1-201ENST00000613262 234 ntBASIC21.8■■□□□ 1.08
RAD23BP54727 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC21.8■■□□□ 1.08
RAD23BP54727 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC21.8■■□□□ 1.08
RAD23BP54727 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
RAD23BP54727 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
RAD23BP54727 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
RAD23BP54727 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC21.79■■□□□ 1.08
RAD23BP54727 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC21.79■■□□□ 1.08
RAD23BP54727 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RAD23BP54727 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
RAD23BP54727 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
RAD23BP54727 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
RAD23BP54727 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC21.79■■□□□ 1.08
RAD23BP54727 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
RAD23BP54727 MCRIP2P1-201ENST00000394346 511 ntBASIC21.79■■□□□ 1.08
RAD23BP54727 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC21.79■■□□□ 1.08
RAD23BP54727 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RAD23BP54727 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC21.79■■□□□ 1.08
RAD23BP54727 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC21.79■■□□□ 1.08
RAD23BP54727 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC21.79■■□□□ 1.08
RAD23BP54727 MARS-234ENST00000630571 216 ntTSL 5 BASIC21.79■■□□□ 1.08
RAD23BP54727 MARS-235ENST00000630803 183 ntTSL 3 BASIC21.79■■□□□ 1.08
RAD23BP54727 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
RAD23BP54727 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RAD23BP54727 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RAD23BP54727 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RAD23BP54727 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RAD23BP54727 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
RAD23BP54727 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC21.78■■□□□ 1.08
RAD23BP54727 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
RAD23BP54727 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
RAD23BP54727 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
RAD23BP54727 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
RAD23BP54727 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
RAD23BP54727 ME2-216ENST00000639850 2331 ntTSL 5 BASIC21.78■■□□□ 1.08
RAD23BP54727 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
RAD23BP54727 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RAD23BP54727 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC21.78■■□□□ 1.08
RAD23BP54727 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RAD23BP54727 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RAD23BP54727 AL355472.2-201ENST00000422958 438 ntBASIC21.78■■□□□ 1.08
RAD23BP54727 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC21.78■■□□□ 1.08
RAD23BP54727 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC21.78■■□□□ 1.08
RAD23BP54727 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
RAD23BP54727 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
RAD23BP54727 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RAD23BP54727 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
RAD23BP54727 AC087633.2-202ENST00000565166 1439 ntBASIC21.78■■□□□ 1.08
RAD23BP54727 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC21.78■■□□□ 1.08
RAD23BP54727 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC21.78■■□□□ 1.08
RAD23BP54727 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
RAD23BP54727 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
RAD23BP54727 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC21.78■■□□□ 1.08
RAD23BP54727 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RAD23BP54727 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
RAD23BP54727 BID-203ENST00000399765 1879 ntTSL 2 BASIC21.77■■□□□ 1.08
RAD23BP54727 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RAD23BP54727 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
RAD23BP54727 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RAD23BP54727 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
RAD23BP54727 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
RAD23BP54727 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC21.77■■□□□ 1.08
RAD23BP54727 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC21.77■■□□□ 1.08
RAD23BP54727 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
RAD23BP54727 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RAD23BP54727 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC21.77■■□□□ 1.08
RAD23BP54727 GUSBP6-202ENST00000438529 1198 ntBASIC21.77■■□□□ 1.08
RAD23BP54727 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC21.77■■□□□ 1.08
RAD23BP54727 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC21.77■■□□□ 1.08
RAD23BP54727 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC21.77■■□□□ 1.08
RAD23BP54727 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms