Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC37■■■■□ 3.51
SMARCA4P51532 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC36.99■■■■□ 3.51
SMARCA4P51532 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC36.99■■■■□ 3.51
SMARCA4P51532 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC36.99■■■■□ 3.51
SMARCA4P51532 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC36.99■■■■□ 3.51
SMARCA4P51532 HTR7P1-201ENST00000538670 1336 ntBASIC36.99■■■■□ 3.51
SMARCA4P51532 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC36.99■■■■□ 3.51
SMARCA4P51532 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC36.99■■■■□ 3.51
SMARCA4P51532 FDX2-207ENST00000494368 584 ntTSL 4 BASIC36.99■■■■□ 3.51
SMARCA4P51532 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC36.99■■■■□ 3.51
SMARCA4P51532 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC36.98■■■■□ 3.51
SMARCA4P51532 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC36.98■■■■□ 3.51
SMARCA4P51532 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC36.98■■■■□ 3.51
SMARCA4P51532 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC36.98■■■■□ 3.51
SMARCA4P51532 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC36.98■■■■□ 3.51
SMARCA4P51532 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC36.98■■■■□ 3.51
SMARCA4P51532 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC36.97■■■■□ 3.51
SMARCA4P51532 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC36.97■■■■□ 3.51
SMARCA4P51532 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC36.97■■■■□ 3.51
SMARCA4P51532 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC36.97■■■■□ 3.51
SMARCA4P51532 DECR2-212ENST00000627716 352 ntTSL 2 BASIC36.97■■■■□ 3.51
SMARCA4P51532 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC36.97■■■■□ 3.51
SMARCA4P51532 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC36.97■■■■□ 3.51
SMARCA4P51532 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC36.97■■■■□ 3.51
SMARCA4P51532 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC36.97■■■■□ 3.51
SMARCA4P51532 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC36.97■■■■□ 3.51
SMARCA4P51532 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC36.97■■■■□ 3.51
SMARCA4P51532 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC36.96■■■■□ 3.51
SMARCA4P51532 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC36.96■■■■□ 3.51
SMARCA4P51532 TREX2-204ENST00000370212 861 ntTSL 5 BASIC36.96■■■■□ 3.51
SMARCA4P51532 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC36.96■■■■□ 3.51
SMARCA4P51532 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC36.96■■■■□ 3.51
SMARCA4P51532 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC36.96■■■■□ 3.51
SMARCA4P51532 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC36.96■■■■□ 3.51
SMARCA4P51532 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC36.96■■■■□ 3.51
SMARCA4P51532 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC36.96■■■■□ 3.51
SMARCA4P51532 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC36.96■■■■□ 3.51
SMARCA4P51532 FAM197Y1-201ENST00000421178 764 ntBASIC36.96■■■■□ 3.51
SMARCA4P51532 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC36.96■■■■□ 3.51
SMARCA4P51532 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC36.96■■■■□ 3.51
SMARCA4P51532 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC36.96■■■■□ 3.51
SMARCA4P51532 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC36.95■■■■□ 3.51
SMARCA4P51532 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC36.95■■■■□ 3.51
SMARCA4P51532 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC36.95■■■■□ 3.51
SMARCA4P51532 AC124283.5-201ENST00000624661 1809 ntBASIC36.95■■■■□ 3.51
SMARCA4P51532 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC36.95■■■■□ 3.51
SMARCA4P51532 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC36.95■■■■□ 3.51
SMARCA4P51532 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC36.95■■■■□ 3.51
SMARCA4P51532 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC36.95■■■■□ 3.51
SMARCA4P51532 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC36.94■■■■□ 3.5
SMARCA4P51532 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC36.94■■■■□ 3.5
SMARCA4P51532 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC36.94■■■■□ 3.5
SMARCA4P51532 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC36.94■■■■□ 3.5
SMARCA4P51532 DUT-205ENST00000558813 769 ntTSL 2 BASIC36.94■■■■□ 3.5
SMARCA4P51532 AL049597.2-201ENST00000565575 961 ntBASIC36.94■■■■□ 3.5
SMARCA4P51532 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC36.94■■■■□ 3.5
SMARCA4P51532 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC36.94■■■■□ 3.5
SMARCA4P51532 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC36.93■■■■□ 3.5
SMARCA4P51532 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC36.93■■■■□ 3.5
SMARCA4P51532 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC36.93■■■■□ 3.5
SMARCA4P51532 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC36.93■■■■□ 3.5
SMARCA4P51532 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC36.92■■■■□ 3.5
SMARCA4P51532 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC36.92■■■■□ 3.5
SMARCA4P51532 RNF146-204ENST00000476956 884 ntTSL 2 BASIC36.92■■■■□ 3.5
SMARCA4P51532 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC36.92■■■■□ 3.5
SMARCA4P51532 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC36.92■■■■□ 3.5
SMARCA4P51532 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC36.92■■■■□ 3.5
SMARCA4P51532 AL355355.2-201ENST00000442321 338 ntBASIC36.92■■■■□ 3.5
SMARCA4P51532 NT5C-211ENST00000582170 653 ntTSL 3 BASIC36.92■■■■□ 3.5
SMARCA4P51532 AP000525.1-201ENST00000608286 694 ntBASIC36.92■■■■□ 3.5
SMARCA4P51532 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC36.92■■■■□ 3.5
SMARCA4P51532 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC36.91■■■■□ 3.5
SMARCA4P51532 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC36.91■■■■□ 3.5
SMARCA4P51532 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC36.91■■■■□ 3.5
SMARCA4P51532 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC36.91■■■■□ 3.5
SMARCA4P51532 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC36.91■■■■□ 3.5
SMARCA4P51532 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC36.91■■■■□ 3.5
SMARCA4P51532 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC36.91■■■■□ 3.5
SMARCA4P51532 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC36.91■■■■□ 3.5
SMARCA4P51532 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC36.9■■■■□ 3.5
SMARCA4P51532 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC36.9■■■■□ 3.5
SMARCA4P51532 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC36.9■■■■□ 3.5
SMARCA4P51532 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC36.9■■■■□ 3.5
SMARCA4P51532 AC005521.1-201ENST00000393351 872 ntBASIC36.9■■■■□ 3.5
SMARCA4P51532 KRT18P57-201ENST00000443599 1254 ntBASIC36.9■■■■□ 3.5
SMARCA4P51532 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC36.9■■■■□ 3.5
SMARCA4P51532 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC36.9■■■■□ 3.5
SMARCA4P51532 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC36.9■■■■□ 3.5
SMARCA4P51532 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC36.9■■■■□ 3.5
SMARCA4P51532 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC36.9■■■■□ 3.5
SMARCA4P51532 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC36.89■■■■□ 3.5
SMARCA4P51532 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC36.89■■■■□ 3.5
SMARCA4P51532 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC36.89■■■■□ 3.5
SMARCA4P51532 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC36.89■■■■□ 3.5
SMARCA4P51532 AL121906.2-201ENST00000621597 723 ntBASIC36.89■■■■□ 3.5
SMARCA4P51532 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC36.89■■■■□ 3.5
SMARCA4P51532 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC36.89■■■■□ 3.5
SMARCA4P51532 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC36.89■■■■□ 3.5
SMARCA4P51532 TERF1P1-201ENST00000311003 1181 ntBASIC36.88■■■■□ 3.5
SMARCA4P51532 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC36.88■■■■□ 3.5
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms