Protein–RNA interactions for Protein: P48565

RIM21, pH-response regulator protein palH/RIM21, yeastyeast

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RIM21P48565 tQ(UUG)D3tQ(UUG)D3 72 nt3.94□□□□□ -1.78
RIM21P48565 tQ(UUG)E1tQ(UUG)E1 72 nt3.94□□□□□ -1.78
RIM21P48565 tQ(UUG)HtQ(UUG)H 72 nt3.94□□□□□ -1.78
RIM21P48565 tQ(UUG)LtQ(UUG)L 72 nt3.94□□□□□ -1.78
RIM21P48565 YIL059CYIL059C 366 nt3.94□□□□□ -1.78
RIM21P48565 PHS1YJL097W 654 nt3.94□□□□□ -1.78
RIM21P48565 HHT1YBR010W 411 nt3.94□□□□□ -1.78
RIM21P48565 YOR302WYOR302W 78 nt3.94□□□□□ -1.78
RIM21P48565 YBR121C-AYBR121C-A 159 nt3.94□□□□□ -1.78
RIM21P48565 RAD4YER162C 2265 nt3.94□□□□□ -1.78
RIM21P48565 PTA1YAL043C 2358 nt3.94□□□□□ -1.78
RIM21P48565 EPL1YFL024C 2499 nt3.93□□□□□ -1.78
RIM21P48565 YEL014CYEL014C 306 nt3.93□□□□□ -1.78
RIM21P48565 RAM2YKL019W 951 nt3.93□□□□□ -1.78
RIM21P48565 YMR141W-AYMR141W-A 225 nt3.93□□□□□ -1.78
RIM21P48565 YNL205CYNL205C 423 nt3.93□□□□□ -1.78
RIM21P48565 YPR063CYPR063C 423 nt3.93□□□□□ -1.78
RIM21P48565 SOK2YMR016C 2358 nt3.93□□□□□ -1.78
RIM21P48565 SYT1YPR095C 3681 nt3.93□□□□□ -1.78
RIM21P48565 PUF6YDR496C 1971 nt3.93□□□□□ -1.78
RIM21P48565 SPC105YGL093W 2754 nt3.92□□□□□ -1.78
RIM21P48565 SNF2YOR290C 5112 nt3.92□□□□□ -1.78
RIM21P48565 YER189WYER189W 369 nt3.92□□□□□ -1.78
RIM21P48565 YMR324CYMR324C 243 nt3.92□□□□□ -1.78
RIM21P48565 YNL010WYNL010W 726 nt3.92□□□□□ -1.78
RIM21P48565 CDC20YGL116W 1833 nt3.92□□□□□ -1.78
RIM21P48565 ABP140YOR239W 1887 nt3.92□□□□□ -1.78
RIM21P48565 BOI1YBL085W 2943 nt3.91□□□□□ -1.78
RIM21P48565 RPN2YIL075C 2838 nt3.91□□□□□ -1.78
RIM21P48565 snR60snR60 104 nt3.91□□□□□ -1.78
RIM21P48565 YDR193WYDR193W 399 nt3.91□□□□□ -1.78
RIM21P48565 YER088C-AYER088C-A 324 nt3.91□□□□□ -1.78
RIM21P48565 YHL041WYHL041W 450 nt3.91□□□□□ -1.78
RIM21P48565 YMR194C-AYMR194C-A 225 nt3.91□□□□□ -1.78
RIM21P48565 PEX1YKL197C 3132 nt3.91□□□□□ -1.78
RIM21P48565 SPT10YJL127C 1923 nt3.91□□□□□ -1.78
RIM21P48565 NPC2YDL046W 522 nt3.9□□□□□ -1.79
RIM21P48565 YJL150WYJL150W 303 nt3.9□□□□□ -1.79
RIM21P48565 VPS55YJR044C 423 nt3.9□□□□□ -1.79
RIM21P48565 MRPL33YMR286W 261 nt3.9□□□□□ -1.79
RIM21P48565 YGR250CYGR250C 2346 nt3.89□□□□□ -1.79
RIM21P48565 KAR3YPR141C 2190 nt3.89□□□□□ -1.79
RIM21P48565 APC2YLR127C 2562 nt3.89□□□□□ -1.79
RIM21P48565 DUF1YOL087C 3351 nt3.89□□□□□ -1.79
RIM21P48565 GIN4YDR507C 3429 nt3.89□□□□□ -1.79
RIM21P48565 QCR7YDR529C 384 nt3.89□□□□□ -1.79
RIM21P48565 PRP39YML046W 1890 nt3.89□□□□□ -1.79
RIM21P48565 PSO2YMR137C 1986 nt3.89□□□□□ -1.79
RIM21P48565 SDH6YDR379C-A 240 nt3.88□□□□□ -1.79
RIM21P48565 SUP56tL(CAA)A 82 nt3.88□□□□□ -1.79
RIM21P48565 SUP53tL(CAA)C 82 nt3.88□□□□□ -1.79
RIM21P48565 tL(CAA)DtL(CAA)D 82 nt3.88□□□□□ -1.79
RIM21P48565 tL(CAA)G1tL(CAA)G1 82 nt3.88□□□□□ -1.79
RIM21P48565 SUP54tL(CAA)G2 82 nt3.88□□□□□ -1.79
RIM21P48565 tL(CAA)G3tL(CAA)G3 82 nt3.88□□□□□ -1.79
RIM21P48565 tL(CAA)KtL(CAA)K 82 nt3.88□□□□□ -1.79
RIM21P48565 tL(CAA)LtL(CAA)L 82 nt3.88□□□□□ -1.79
RIM21P48565 tL(CAA)MtL(CAA)M 82 nt3.88□□□□□ -1.79
RIM21P48565 tL(CAA)NtL(CAA)N 82 nt3.88□□□□□ -1.79
RIM21P48565 YGL024WYGL024W 336 nt3.88□□□□□ -1.79
RIM21P48565 GEP4YHR100C 558 nt3.88□□□□□ -1.79
RIM21P48565 RDN5-1RDN5-1 121 nt3.88□□□□□ -1.79
RIM21P48565 RDN5-6RDN5-6 121 nt3.88□□□□□ -1.79
RIM21P48565 MDV1YJL112W 2145 nt3.88□□□□□ -1.79
RIM21P48565 YGL074CYGL074C 327 nt3.87□□□□□ -1.79
RIM21P48565 LSO2YGR169C-A 279 nt3.87□□□□□ -1.79
RIM21P48565 RPL14AYKL006W 417 nt3.87□□□□□ -1.79
RIM21P48565 YLR154W-EYLR154W-E 204 nt3.87□□□□□ -1.79
RIM21P48565 RPL38YLR325C 237 nt3.87□□□□□ -1.79
RIM21P48565 YNL028WYNL028W 318 nt3.87□□□□□ -1.79
RIM21P48565 RAD5YLR032W 3510 nt3.86□□□□□ -1.79
RIM21P48565 DFG16YOR030W 1860 nt3.86□□□□□ -1.79
RIM21P48565 DLS1YJL065C 504 nt3.86□□□□□ -1.79
RIM21P48565 YGL140CYGL140C 3660 nt3.86□□□□□ -1.79
RIM21P48565 DIA2YOR080W 2199 nt3.86□□□□□ -1.79
RIM21P48565 BAS1YKR099W 2436 nt3.85□□□□□ -1.79
RIM21P48565 SSM4YIL030C 3960 nt3.85□□□□□ -1.79
RIM21P48565 tF(GAA)QtF(GAA)Q 75 nt3.85□□□□□ -1.79
RIM21P48565 PCC1YKR095W-A 267 nt3.85□□□□□ -1.79
RIM21P48565 NCR1YPL006W 3513 nt3.84□□□□□ -1.79
RIM21P48565 TIM11YDR322C-A 291 nt3.84□□□□□ -1.79
RIM21P48565 VPS53YJL029C 2469 nt3.84□□□□□ -1.8
RIM21P48565 SRP72YPL210C 1923 nt3.83□□□□□ -1.8
RIM21P48565 DOT6YER088C 2013 nt3.83□□□□□ -1.8
RIM21P48565 ZDS2YML109W 2829 nt3.83□□□□□ -1.8
RIM21P48565 snR85snR85 171 nt3.83□□□□□ -1.8
RIM21P48565 OLI1Q0130 231 nt3.83□□□□□ -1.8
RIM21P48565 YHR032C-AYHR032C-A 120 nt3.83□□□□□ -1.8
RIM21P48565 NOG1YPL093W 1944 nt3.83□□□□□ -1.8
RIM21P48565 MCM7YBR202W 2538 nt3.82□□□□□ -1.8
RIM21P48565 TRM2YKR056W 1920 nt3.82□□□□□ -1.8
RIM21P48565 RPL25YOL127W 429 nt3.82□□□□□ -1.8
RIM21P48565 ITC1YGL133W 3795 nt3.82□□□□□ -1.8
RIM21P48565 STE23YLR389C 3084 nt3.82□□□□□ -1.8
RIM21P48565 SNU114YKL173W 3027 nt3.82□□□□□ -1.8
RIM21P48565 ASG1YIL130W 2895 nt3.82□□□□□ -1.8
RIM21P48565 HDA3YPR179C 1968 nt3.82□□□□□ -1.8
RIM21P48565 YIL020C-AYIL020C-A 339 nt3.81□□□□□ -1.8
RIM21P48565 YLR140WYLR140W 327 nt3.81□□□□□ -1.8
RIM21P48565 YML007C-AYML007C-A 111 nt3.81□□□□□ -1.8
Retrieved 100 of 7,029 protein–RNA pairs in 23.1 ms