Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 AC133552.2-202ENST00000575694 574 ntBASIC16.64■□□□□ 0.25
CEACAM3P40198 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC16.64■□□□□ 0.25
CEACAM3P40198 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CEACAM3P40198 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CEACAM3P40198 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC16.64■□□□□ 0.25
CEACAM3P40198 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC16.64■□□□□ 0.25
CEACAM3P40198 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CEACAM3P40198 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CEACAM3P40198 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
CEACAM3P40198 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC16.64■□□□□ 0.25
CEACAM3P40198 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC16.64■□□□□ 0.25
CEACAM3P40198 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CEACAM3P40198 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
CEACAM3P40198 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CEACAM3P40198 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
CEACAM3P40198 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CEACAM3P40198 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CEACAM3P40198 AL512625.2-201ENST00000417533 625 ntBASIC16.63■□□□□ 0.25
CEACAM3P40198 AC016405.3-201ENST00000607710 860 ntBASIC16.63■□□□□ 0.25
CEACAM3P40198 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CEACAM3P40198 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CEACAM3P40198 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CEACAM3P40198 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CEACAM3P40198 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC16.63■□□□□ 0.25
CEACAM3P40198 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CEACAM3P40198 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CEACAM3P40198 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
CEACAM3P40198 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CEACAM3P40198 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CEACAM3P40198 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CEACAM3P40198 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CEACAM3P40198 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC16.62■□□□□ 0.25
CEACAM3P40198 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC16.62■□□□□ 0.25
CEACAM3P40198 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC16.62■□□□□ 0.25
CEACAM3P40198 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CEACAM3P40198 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CEACAM3P40198 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CEACAM3P40198 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CEACAM3P40198 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CEACAM3P40198 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CEACAM3P40198 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CEACAM3P40198 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC16.62■□□□□ 0.25
CEACAM3P40198 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CEACAM3P40198 MCRIP2P1-201ENST00000394346 511 ntBASIC16.62■□□□□ 0.25
CEACAM3P40198 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC16.62■□□□□ 0.25
CEACAM3P40198 VMO1-204ENST00000441199 741 ntTSL 2 BASIC16.62■□□□□ 0.25
CEACAM3P40198 AF201337.1-201ENST00000520239 748 ntBASIC16.62■□□□□ 0.25
CEACAM3P40198 RAP2CP1-201ENST00000605103 478 ntBASIC16.62■□□□□ 0.25
CEACAM3P40198 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CEACAM3P40198 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CEACAM3P40198 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CEACAM3P40198 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CEACAM3P40198 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CEACAM3P40198 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CEACAM3P40198 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
CEACAM3P40198 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC16.61■□□□□ 0.25
CEACAM3P40198 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC16.61■□□□□ 0.25
CEACAM3P40198 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
CEACAM3P40198 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CEACAM3P40198 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CEACAM3P40198 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CEACAM3P40198 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
CEACAM3P40198 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC16.61■□□□□ 0.25
CEACAM3P40198 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CEACAM3P40198 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CEACAM3P40198 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC16.61■□□□□ 0.25
CEACAM3P40198 AL121832.2-201ENST00000610979 668 ntBASIC16.61■□□□□ 0.25
CEACAM3P40198 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC16.61■□□□□ 0.25
CEACAM3P40198 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC16.61■□□□□ 0.25
CEACAM3P40198 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC16.61■□□□□ 0.25
CEACAM3P40198 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CEACAM3P40198 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CEACAM3P40198 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC16.61■□□□□ 0.25
CEACAM3P40198 AC027702.1-201ENST00000563810 1770 ntBASIC16.61■□□□□ 0.25
CEACAM3P40198 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC16.61■□□□□ 0.25
CEACAM3P40198 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CEACAM3P40198 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CEACAM3P40198 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC16.61■□□□□ 0.25
CEACAM3P40198 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CEACAM3P40198 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CEACAM3P40198 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CEACAM3P40198 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CEACAM3P40198 USP48-205ENST00000421625 2818 ntTSL 2 BASIC16.6■□□□□ 0.25
CEACAM3P40198 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CEACAM3P40198 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC16.6■□□□□ 0.25
CEACAM3P40198 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC16.6■□□□□ 0.25
CEACAM3P40198 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CEACAM3P40198 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CEACAM3P40198 PLK5-205ENST00000642079 1969 ntBASIC16.6■□□□□ 0.25
CEACAM3P40198 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CEACAM3P40198 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CEACAM3P40198 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CEACAM3P40198 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
CEACAM3P40198 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
CEACAM3P40198 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CEACAM3P40198 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CEACAM3P40198 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CEACAM3P40198 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC16.59■□□□□ 0.25
CEACAM3P40198 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC16.59■□□□□ 0.25
CEACAM3P40198 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms