Protein–RNA interactions for Protein: P38848

PEX28, Peroxisomal membrane protein PEX28, yeastyeast

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PEX28P38848 CSN9YDR179C 489 nt3.46□□□□□ -1.86
PEX28P38848 CCW14YLR390W-A 717 nt3.46□□□□□ -1.86
PEX28P38848 TRM7YBR061C 933 nt3.46□□□□□ -1.86
PEX28P38848 snR49snR49 165 nt3.46□□□□□ -1.86
PEX28P38848 MET10YFR030W 3108 nt3.46□□□□□ -1.86
PEX28P38848 SSE1YPL106C 2082 nt3.46□□□□□ -1.86
PEX28P38848 VPS64YDR200C 1815 nt3.46□□□□□ -1.86
PEX28P38848 SIZ1YDR409W 2715 nt3.46□□□□□ -1.86
PEX28P38848 DOA4YDR069C 2781 nt3.46□□□□□ -1.86
PEX28P38848 SKT5YBL061C 2091 nt3.45□□□□□ -1.86
PEX28P38848 YIL166CYIL166C 1629 nt3.45□□□□□ -1.86
PEX28P38848 FAR1YJL157C 2493 nt3.45□□□□□ -1.86
PEX28P38848 YIL066W-AYIL066W-A 444 nt3.45□□□□□ -1.86
PEX28P38848 DAD3YBR233W-A 285 nt3.45□□□□□ -1.86
PEX28P38848 ARP7YPR034W 1434 nt3.44□□□□□ -1.86
PEX28P38848 RLF2YPR018W 1821 nt3.44□□□□□ -1.86
PEX28P38848 YCK3YER123W 1575 nt3.44□□□□□ -1.86
PEX28P38848 YER121WYER121W 345 nt3.44□□□□□ -1.86
PEX28P38848 HTB2YBL002W 396 nt3.44□□□□□ -1.86
PEX28P38848 YPR146CYPR146C 330 nt3.44□□□□□ -1.86
PEX28P38848 snR42snR42 351 nt3.44□□□□□ -1.86
PEX28P38848 SET1YHR119W 3243 nt3.44□□□□□ -1.86
PEX28P38848 TCP1YDR212W 1680 nt3.43□□□□□ -1.86
PEX28P38848 PKH1YDR490C 2301 nt3.43□□□□□ -1.86
PEX28P38848 PAC1YOR269W 1485 nt3.43□□□□□ -1.86
PEX28P38848 RPB2YOR151C 3675 nt3.43□□□□□ -1.86
PEX28P38848 BOI1YBL085W 2943 nt3.43□□□□□ -1.86
PEX28P38848 YGL239CYGL239C 315 nt3.43□□□□□ -1.86
PEX28P38848 AYR1YIL124W 894 nt3.43□□□□□ -1.86
PEX28P38848 SDH2YLL041C 801 nt3.43□□□□□ -1.86
PEX28P38848 YMR307C-AYMR307C-A 195 nt3.43□□□□□ -1.86
PEX28P38848 XRS2YDR369C 2565 nt3.43□□□□□ -1.86
PEX28P38848 MDV1YJL112W 2145 nt3.43□□□□□ -1.86
PEX28P38848 MLH2YLR035C 2088 nt3.42□□□□□ -1.86
PEX28P38848 ALG13YGL047W 609 nt3.42□□□□□ -1.86
PEX28P38848 TIM13YGR181W 318 nt3.42□□□□□ -1.86
PEX28P38848 ABF2YMR072W 552 nt3.42□□□□□ -1.86
PEX28P38848 MF(ALPHA)1YPL187W 498 nt3.42□□□□□ -1.86
PEX28P38848 DIA2YOR080W 2199 nt3.42□□□□□ -1.86
PEX28P38848 SPB1YCL054W 2526 nt3.41□□□□□ -1.86
PEX28P38848 YDR048CYDR048C 315 nt3.41□□□□□ -1.86
PEX28P38848 RPL32YBL092W 393 nt3.41□□□□□ -1.86
PEX28P38848 YOR008C-AYOR008C-A 225 nt3.41□□□□□ -1.86
PEX28P38848 MCD1YDL003W 1701 nt3.41□□□□□ -1.86
PEX28P38848 APC2YLR127C 2562 nt3.4□□□□□ -1.86
PEX28P38848 YFH1YDL120W 525 nt3.4□□□□□ -1.87
PEX28P38848 YEL020C-BYEL020C-B 198 nt3.4□□□□□ -1.87
PEX28P38848 tV(CAC)DtV(CAC)D 73 nt3.4□□□□□ -1.87
PEX28P38848 tV(CAC)HtV(CAC)H 73 nt3.4□□□□□ -1.87
PEX28P38848 RPL40AYIL148W 387 nt3.4□□□□□ -1.87
PEX28P38848 RPL36BYPL249C-A 303 nt3.4□□□□□ -1.87
PEX28P38848 YDL062WYDL062W 426 nt3.39□□□□□ -1.87
PEX28P38848 APQ12YIL040W 417 nt3.39□□□□□ -1.87
PEX28P38848 RAM2YKL019W 951 nt3.39□□□□□ -1.87
PEX28P38848 YAL059C-AYAL059C-A 423 nt3.39□□□□□ -1.87
PEX28P38848 EPL1YFL024C 2499 nt3.39□□□□□ -1.87
PEX28P38848 VTC4YJL012C 2166 nt3.39□□□□□ -1.87
PEX28P38848 STE23YLR389C 3084 nt3.39□□□□□ -1.87
PEX28P38848 MDN1YLR106C 14733 nt3.38□□□□□ -1.87
PEX28P38848 ISD11YER048W-A 285 nt3.38□□□□□ -1.87
PEX28P38848 YER189WYER189W 369 nt3.38□□□□□ -1.87
PEX28P38848 YIL102CYIL102C 306 nt3.38□□□□□ -1.87
PEX28P38848 YOL155W-AYOL155W-A 135 nt3.38□□□□□ -1.87
PEX28P38848 DBP6YNR038W 1890 nt3.38□□□□□ -1.87
PEX28P38848 SMC2YFR031C 3513 nt3.38□□□□□ -1.87
PEX28P38848 RAD61YDR014W 1944 nt3.38□□□□□ -1.87
PEX28P38848 NTO1YPR031W 2247 nt3.38□□□□□ -1.87
PEX28P38848 YGL041CYGL041C 204 nt3.37□□□□□ -1.87
PEX28P38848 YMR324CYMR324C 243 nt3.37□□□□□ -1.87
PEX28P38848 YCL023CYCL023C 348 nt3.37□□□□□ -1.87
PEX28P38848 PSO2YMR137C 1986 nt3.37□□□□□ -1.87
PEX28P38848 HCS1YKL017C 2052 nt3.37□□□□□ -1.87
PEX28P38848 VAS1YGR094W 3315 nt3.37□□□□□ -1.87
PEX28P38848 YPP1YGR198W 2454 nt3.36□□□□□ -1.87
PEX28P38848 KAP95YLR347C 2586 nt3.36□□□□□ -1.87
PEX28P38848 NPR3YHL023C 3441 nt3.36□□□□□ -1.87
PEX28P38848 YJL182CYJL182C 318 nt3.36□□□□□ -1.87
PEX28P38848 SOK1YDR006C 2706 nt3.36□□□□□ -1.87
PEX28P38848 RPA190YOR341W 4995 nt3.36□□□□□ -1.87
PEX28P38848 DIS3YOL021C 3006 nt3.36□□□□□ -1.87
PEX28P38848 TIM11YDR322C-A 291 nt3.35□□□□□ -1.87
PEX28P38848 YHL042WYHL042W 453 nt3.35□□□□□ -1.87
PEX28P38848 GCD6YDR211W 2139 nt3.35□□□□□ -1.87
PEX28P38848 YOL057WYOL057W 2136 nt3.35□□□□□ -1.87
PEX28P38848 PEX1YKL197C 3132 nt3.35□□□□□ -1.87
PEX28P38848 YDL242WYDL242W 354 nt3.34□□□□□ -1.87
PEX28P38848 YBR121C-AYBR121C-A 159 nt3.34□□□□□ -1.87
PEX28P38848 RRP5YMR229C 5190 nt3.34□□□□□ -1.88
PEX28P38848 PUF6YDR496C 1971 nt3.34□□□□□ -1.88
PEX28P38848 COG8YML071C 1824 nt3.33□□□□□ -1.88
PEX28P38848 YAT2YER024W 2772 nt3.33□□□□□ -1.88
PEX28P38848 ASG1YIL130W 2895 nt3.33□□□□□ -1.88
PEX28P38848 YGL074CYGL074C 327 nt3.33□□□□□ -1.88
PEX28P38848 YIL032CYIL032C 357 nt3.33□□□□□ -1.88
PEX28P38848 PAM16YJL104W 450 nt3.33□□□□□ -1.88
PEX28P38848 RPS27AYKL156W 249 nt3.33□□□□□ -1.88
PEX28P38848 RPS12YOR369C 432 nt3.33□□□□□ -1.88
PEX28P38848 PSK2YOL045W 3306 nt3.33□□□□□ -1.88
PEX28P38848 GIN4YDR507C 3429 nt3.33□□□□□ -1.88
PEX28P38848 TRM2YKR056W 1920 nt3.32□□□□□ -1.88
Retrieved 100 of 7,029 protein–RNA pairs in 64.4 ms