Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC21.51■■□□□ 1.03
RFC1P35251 PLLP-204ENST00000569059 665 ntTSL 3 BASIC21.51■■□□□ 1.03
RFC1P35251 AL591742.1-201ENST00000604433 565 ntBASIC21.51■■□□□ 1.03
RFC1P35251 AC092437.1-201ENST00000624794 1048 ntBASIC21.51■■□□□ 1.03
RFC1P35251 AC013268.1-206ENST00000638368 961 ntBASIC21.51■■□□□ 1.03
RFC1P35251 AC112229.1-201ENST00000639295 961 ntBASIC21.51■■□□□ 1.03
RFC1P35251 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC21.51■■□□□ 1.03
RFC1P35251 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC21.51■■□□□ 1.03
RFC1P35251 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC21.51■■□□□ 1.03
RFC1P35251 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC21.51■■□□□ 1.03
RFC1P35251 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
RFC1P35251 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
RFC1P35251 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC21.51■■□□□ 1.03
RFC1P35251 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RFC1P35251 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RFC1P35251 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RFC1P35251 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC21.5■■□□□ 1.03
RFC1P35251 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC21.5■■□□□ 1.03
RFC1P35251 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RFC1P35251 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RFC1P35251 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC21.5■■□□□ 1.03
RFC1P35251 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RFC1P35251 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
RFC1P35251 CDV3P1-201ENST00000471403 739 ntBASIC21.5■■□□□ 1.03
RFC1P35251 AC007322.4-201ENST00000509611 723 ntBASIC21.5■■□□□ 1.03
RFC1P35251 MIR2861-201ENST00000636310 90 ntBASIC21.5■■□□□ 1.03
RFC1P35251 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RFC1P35251 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RFC1P35251 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RFC1P35251 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RFC1P35251 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
RFC1P35251 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RFC1P35251 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RFC1P35251 GABARAPL3-202ENST00000624044 1851 ntBASIC21.49■■□□□ 1.03
RFC1P35251 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
RFC1P35251 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RFC1P35251 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
RFC1P35251 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RFC1P35251 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
RFC1P35251 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
RFC1P35251 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
RFC1P35251 VMO1-204ENST00000441199 741 ntTSL 2 BASIC21.49■■□□□ 1.03
RFC1P35251 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
RFC1P35251 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
RFC1P35251 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
RFC1P35251 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
RFC1P35251 IKBKGP1-201ENST00000612193 1073 ntBASIC21.49■■□□□ 1.03
RFC1P35251 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
RFC1P35251 BID-214ENST00000617586 542 ntTSL 5 BASIC21.49■■□□□ 1.03
RFC1P35251 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
RFC1P35251 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RFC1P35251 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RFC1P35251 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC21.49■■□□□ 1.03
RFC1P35251 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RFC1P35251 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RFC1P35251 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
RFC1P35251 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
RFC1P35251 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RFC1P35251 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
RFC1P35251 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RFC1P35251 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
RFC1P35251 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC21.48■■□□□ 1.03
RFC1P35251 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RFC1P35251 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RFC1P35251 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
RFC1P35251 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC21.48■■□□□ 1.03
RFC1P35251 AC016405.3-201ENST00000607710 860 ntBASIC21.48■■□□□ 1.03
RFC1P35251 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC21.48■■□□□ 1.03
RFC1P35251 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RFC1P35251 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RFC1P35251 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
RFC1P35251 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC21.48■■□□□ 1.03
RFC1P35251 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC21.48■■□□□ 1.03
RFC1P35251 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC21.48■■□□□ 1.03
RFC1P35251 GAS2L1P2-201ENST00000436355 1356 ntBASIC21.48■■□□□ 1.03
RFC1P35251 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
RFC1P35251 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RFC1P35251 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RFC1P35251 AC020907.5-201ENST00000624372 1936 ntBASIC21.47■■□□□ 1.03
RFC1P35251 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RFC1P35251 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
RFC1P35251 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
RFC1P35251 PARL-206ENST00000435888 1098 ntTSL 5 BASIC21.47■■□□□ 1.03
RFC1P35251 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC21.47■■□□□ 1.03
RFC1P35251 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC21.47■■□□□ 1.03
RFC1P35251 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
RFC1P35251 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC21.47■■□□□ 1.03
RFC1P35251 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC21.47■■□□□ 1.03
RFC1P35251 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
RFC1P35251 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC21.47■■□□□ 1.03
RFC1P35251 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC21.47■■□□□ 1.03
RFC1P35251 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RFC1P35251 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC21.46■■□□□ 1.03
RFC1P35251 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC21.46■■□□□ 1.03
RFC1P35251 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC21.46■■□□□ 1.03
RFC1P35251 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RFC1P35251 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC21.46■■□□□ 1.03
RFC1P35251 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RFC1P35251 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC21.46■■□□□ 1.03
RFC1P35251 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC21.46■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 122.9 ms