Protein–RNA interactions for Protein: P24385

CCND1, G1/S-specific cyclin-D1, humanhuman

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1P24385 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCND1P24385 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCND1P24385 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
CCND1P24385 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CCND1P24385 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCND1P24385 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCND1P24385 AL049796.1-201ENST00000565336 1766 ntBASIC20.46■□□□□ 0.87
CCND1P24385 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCND1P24385 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
CCND1P24385 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC20.46■□□□□ 0.87
CCND1P24385 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCND1P24385 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CCND1P24385 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCND1P24385 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCND1P24385 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CCND1P24385 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.87
CCND1P24385 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCND1P24385 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCND1P24385 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCND1P24385 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.45■□□□□ 0.86
CCND1P24385 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CCND1P24385 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
CCND1P24385 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
CCND1P24385 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCND1P24385 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCND1P24385 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.45■□□□□ 0.86
CCND1P24385 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC20.45■□□□□ 0.86
CCND1P24385 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC20.45■□□□□ 0.86
CCND1P24385 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC20.45■□□□□ 0.86
CCND1P24385 CCDC92B-201ENST00000575506 885 ntBASIC20.45■□□□□ 0.86
CCND1P24385 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCND1P24385 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCND1P24385 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC20.45■□□□□ 0.86
CCND1P24385 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCND1P24385 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CCND1P24385 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCND1P24385 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC20.45■□□□□ 0.86
CCND1P24385 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
CCND1P24385 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCND1P24385 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCND1P24385 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCND1P24385 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCND1P24385 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCND1P24385 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCND1P24385 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.44■□□□□ 0.86
CCND1P24385 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCND1P24385 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC20.44■□□□□ 0.86
CCND1P24385 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCND1P24385 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CCND1P24385 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCND1P24385 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCND1P24385 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC20.44■□□□□ 0.86
CCND1P24385 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CCND1P24385 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CCND1P24385 KRT18P14-201ENST00000534205 1250 ntBASIC20.44■□□□□ 0.86
CCND1P24385 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC20.44■□□□□ 0.86
CCND1P24385 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.44■□□□□ 0.86
CCND1P24385 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCND1P24385 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CCND1P24385 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCND1P24385 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCND1P24385 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCND1P24385 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCND1P24385 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.44■□□□□ 0.86
CCND1P24385 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.44■□□□□ 0.86
CCND1P24385 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCND1P24385 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
CCND1P24385 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCND1P24385 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.43■□□□□ 0.86
CCND1P24385 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC20.43■□□□□ 0.86
CCND1P24385 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCND1P24385 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
CCND1P24385 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CCND1P24385 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
CCND1P24385 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCND1P24385 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.43■□□□□ 0.86
CCND1P24385 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCND1P24385 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC20.43■□□□□ 0.86
CCND1P24385 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC20.43■□□□□ 0.86
CCND1P24385 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC20.43■□□□□ 0.86
CCND1P24385 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCND1P24385 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCND1P24385 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCND1P24385 AC097381.1-201ENST00000429019 1296 ntBASIC20.43■□□□□ 0.86
CCND1P24385 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.43■□□□□ 0.86
CCND1P24385 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCND1P24385 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCND1P24385 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCND1P24385 LETM1P2-201ENST00000597330 2178 ntBASIC20.43■□□□□ 0.86
CCND1P24385 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.43■□□□□ 0.86
CCND1P24385 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CCND1P24385 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCND1P24385 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CCND1P24385 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
CCND1P24385 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
CCND1P24385 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
CCND1P24385 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC20.42■□□□□ 0.86
CCND1P24385 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC20.42■□□□□ 0.86
CCND1P24385 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCND1P24385 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms