Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
CDH3P22223 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC19.93■□□□□ 0.78
CDH3P22223 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDH3P22223 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
CDH3P22223 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDH3P22223 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDH3P22223 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CDH3P22223 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.93■□□□□ 0.78
CDH3P22223 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDH3P22223 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC19.93■□□□□ 0.78
CDH3P22223 FAM21FP-204ENST00000608637 956 ntBASIC19.93■□□□□ 0.78
CDH3P22223 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
CDH3P22223 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDH3P22223 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CDH3P22223 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
CDH3P22223 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDH3P22223 AC026310.3-201ENST00000625186 2373 ntBASIC19.93■□□□□ 0.78
CDH3P22223 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDH3P22223 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDH3P22223 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC19.93■□□□□ 0.78
CDH3P22223 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDH3P22223 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19.92■□□□□ 0.78
CDH3P22223 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDH3P22223 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC19.92■□□□□ 0.78
CDH3P22223 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDH3P22223 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CDH3P22223 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
CDH3P22223 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDH3P22223 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDH3P22223 MIPEPP3-201ENST00000412105 444 ntBASIC19.92■□□□□ 0.78
CDH3P22223 AC007322.3-201ENST00000426526 701 ntBASIC19.92■□□□□ 0.78
CDH3P22223 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC19.92■□□□□ 0.78
CDH3P22223 ISCU-212ENST00000547005 795 ntTSL 3 BASIC19.92■□□□□ 0.78
CDH3P22223 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CDH3P22223 MIR4758-201ENST00000577688 71 ntBASIC19.92■□□□□ 0.78
CDH3P22223 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC19.92■□□□□ 0.78
CDH3P22223 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC19.92■□□□□ 0.78
CDH3P22223 MARS-234ENST00000630571 216 ntTSL 5 BASIC19.92■□□□□ 0.78
CDH3P22223 MARS-235ENST00000630803 183 ntTSL 3 BASIC19.92■□□□□ 0.78
CDH3P22223 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDH3P22223 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.92■□□□□ 0.78
CDH3P22223 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
CDH3P22223 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.92■□□□□ 0.78
CDH3P22223 AC010980.2-201ENST00000587099 1412 ntBASIC19.92■□□□□ 0.78
CDH3P22223 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDH3P22223 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDH3P22223 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDH3P22223 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
CDH3P22223 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.91■□□□□ 0.78
CDH3P22223 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
CDH3P22223 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDH3P22223 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
CDH3P22223 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDH3P22223 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDH3P22223 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC19.91■□□□□ 0.78
CDH3P22223 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CDH3P22223 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDH3P22223 BX276092.2-201ENST00000417668 665 ntBASIC19.91■□□□□ 0.78
CDH3P22223 RGMA-211ENST00000557420 989 ntTSL 3 BASIC19.91■□□□□ 0.78
CDH3P22223 AC133041.1-202ENST00000642053 222 ntBASIC19.91■□□□□ 0.78
CDH3P22223 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDH3P22223 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CDH3P22223 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDH3P22223 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC19.91■□□□□ 0.78
CDH3P22223 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDH3P22223 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.91■□□□□ 0.78
CDH3P22223 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDH3P22223 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CDH3P22223 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDH3P22223 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
CDH3P22223 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.91■□□□□ 0.78
CDH3P22223 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC19.9■□□□□ 0.78
CDH3P22223 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
CDH3P22223 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDH3P22223 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.9■□□□□ 0.78
CDH3P22223 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDH3P22223 AC069152.1-201ENST00000438030 544 ntBASIC19.9■□□□□ 0.78
CDH3P22223 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC19.9■□□□□ 0.78
CDH3P22223 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC19.9■□□□□ 0.78
CDH3P22223 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
CDH3P22223 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDH3P22223 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19.9■□□□□ 0.78
CDH3P22223 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDH3P22223 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
CDH3P22223 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
CDH3P22223 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDH3P22223 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDH3P22223 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CDH3P22223 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDH3P22223 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC19.89■□□□□ 0.77
CDH3P22223 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.89■□□□□ 0.77
CDH3P22223 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC19.89■□□□□ 0.77
CDH3P22223 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.89■□□□□ 0.77
CDH3P22223 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC19.89■□□□□ 0.77
CDH3P22223 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
CDH3P22223 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.89■□□□□ 0.77
CDH3P22223 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CDH3P22223 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDH3P22223 Z98882.1-201ENST00000622160 2253 ntBASIC19.88■□□□□ 0.77
CDH3P22223 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 541.8 ms