Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CAPN3P20807 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CAPN3P20807 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CAPN3P20807 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CAPN3P20807 RNF165-205ENST00000588679 2904 ntBASIC19.62■□□□□ 0.73
CAPN3P20807 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
CAPN3P20807 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
CAPN3P20807 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.61■□□□□ 0.73
CAPN3P20807 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CAPN3P20807 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
CAPN3P20807 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CAPN3P20807 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CAPN3P20807 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
CAPN3P20807 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC19.61■□□□□ 0.73
CAPN3P20807 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CAPN3P20807 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC19.61■□□□□ 0.73
CAPN3P20807 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
CAPN3P20807 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CAPN3P20807 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CAPN3P20807 AC092720.2-201ENST00000602388 1665 ntBASIC19.61■□□□□ 0.73
CAPN3P20807 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.61■□□□□ 0.73
CAPN3P20807 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CAPN3P20807 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
CAPN3P20807 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CAPN3P20807 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CAPN3P20807 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CAPN3P20807 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC19.6■□□□□ 0.73
CAPN3P20807 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CAPN3P20807 HLA-L-209ENST00000420110 1011 ntBASIC19.6■□□□□ 0.73
CAPN3P20807 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC19.6■□□□□ 0.73
CAPN3P20807 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC19.6■□□□□ 0.73
CAPN3P20807 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC19.6■□□□□ 0.73
CAPN3P20807 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.6■□□□□ 0.73
CAPN3P20807 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC19.6■□□□□ 0.73
CAPN3P20807 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.6■□□□□ 0.73
CAPN3P20807 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CAPN3P20807 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CAPN3P20807 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CAPN3P20807 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC19.6■□□□□ 0.73
CAPN3P20807 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CAPN3P20807 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CAPN3P20807 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.59■□□□□ 0.73
CAPN3P20807 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19.59■□□□□ 0.73
CAPN3P20807 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CAPN3P20807 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
CAPN3P20807 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CAPN3P20807 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
CAPN3P20807 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CAPN3P20807 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.59■□□□□ 0.73
CAPN3P20807 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CAPN3P20807 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC19.59■□□□□ 0.73
CAPN3P20807 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CAPN3P20807 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CAPN3P20807 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CAPN3P20807 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC19.59■□□□□ 0.73
CAPN3P20807 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.59■□□□□ 0.73
CAPN3P20807 MFF-207ENST00000409565 1548 ntTSL 2 BASIC19.59■□□□□ 0.73
CAPN3P20807 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.59■□□□□ 0.73
CAPN3P20807 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CAPN3P20807 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC19.59■□□□□ 0.73
CAPN3P20807 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CAPN3P20807 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.59■□□□□ 0.73
CAPN3P20807 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
CAPN3P20807 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CAPN3P20807 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CAPN3P20807 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CAPN3P20807 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
CAPN3P20807 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
CAPN3P20807 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CAPN3P20807 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
CAPN3P20807 MIR572-201ENST00000384983 95 ntBASIC19.58■□□□□ 0.72
CAPN3P20807 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC19.58■□□□□ 0.72
CAPN3P20807 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
CAPN3P20807 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CAPN3P20807 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
CAPN3P20807 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
CAPN3P20807 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CAPN3P20807 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CAPN3P20807 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.57■□□□□ 0.72
CAPN3P20807 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CAPN3P20807 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CAPN3P20807 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CAPN3P20807 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CAPN3P20807 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CAPN3P20807 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CAPN3P20807 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CAPN3P20807 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
CAPN3P20807 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CAPN3P20807 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
CAPN3P20807 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CAPN3P20807 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
CAPN3P20807 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
CAPN3P20807 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC19.56■□□□□ 0.72
CAPN3P20807 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.56■□□□□ 0.72
CAPN3P20807 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
CAPN3P20807 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CAPN3P20807 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
CAPN3P20807 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC19.56■□□□□ 0.72
CAPN3P20807 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC19.56■□□□□ 0.72
CAPN3P20807 NTF6G-201ENST00000591094 616 ntBASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms