Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC17.85■□□□□ 0.45
RAB3BP20337 DUX4L19-201ENST00000557448 1267 ntBASIC17.85■□□□□ 0.45
RAB3BP20337 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
RAB3BP20337 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC17.85■□□□□ 0.45
RAB3BP20337 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RAB3BP20337 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC17.85■□□□□ 0.45
RAB3BP20337 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC17.85■□□□□ 0.45
RAB3BP20337 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RAB3BP20337 AL158211.5-201ENST00000623583 2518 ntBASIC17.85■□□□□ 0.45
RAB3BP20337 AC125437.2-201ENST00000625180 2167 ntBASIC17.85■□□□□ 0.45
RAB3BP20337 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
RAB3BP20337 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RAB3BP20337 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RAB3BP20337 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
RAB3BP20337 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RAB3BP20337 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC17.84■□□□□ 0.45
RAB3BP20337 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RAB3BP20337 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
RAB3BP20337 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RAB3BP20337 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
RAB3BP20337 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RAB3BP20337 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC17.84■□□□□ 0.45
RAB3BP20337 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
RAB3BP20337 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC17.84■□□□□ 0.45
RAB3BP20337 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC17.84■□□□□ 0.45
RAB3BP20337 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RAB3BP20337 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RAB3BP20337 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC17.84■□□□□ 0.45
RAB3BP20337 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC17.84■□□□□ 0.45
RAB3BP20337 RNF146-206ENST00000480444 843 ntTSL 2 BASIC17.84■□□□□ 0.45
RAB3BP20337 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC17.84■□□□□ 0.45
RAB3BP20337 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC17.84■□□□□ 0.45
RAB3BP20337 AC011298.3-201ENST00000615796 283 ntBASIC17.84■□□□□ 0.45
RAB3BP20337 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RAB3BP20337 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RAB3BP20337 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
RAB3BP20337 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC17.84■□□□□ 0.45
RAB3BP20337 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RAB3BP20337 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
RAB3BP20337 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC17.83■□□□□ 0.45
RAB3BP20337 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC17.83■□□□□ 0.45
RAB3BP20337 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
RAB3BP20337 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RAB3BP20337 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
RAB3BP20337 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
RAB3BP20337 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
RAB3BP20337 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC17.83■□□□□ 0.44
RAB3BP20337 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
RAB3BP20337 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RAB3BP20337 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RAB3BP20337 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RAB3BP20337 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC17.83■□□□□ 0.44
RAB3BP20337 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
RAB3BP20337 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
RAB3BP20337 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RAB3BP20337 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
RAB3BP20337 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RAB3BP20337 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
RAB3BP20337 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RAB3BP20337 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
RAB3BP20337 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RAB3BP20337 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RAB3BP20337 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RAB3BP20337 RARRES2P1-201ENST00000474487 481 ntBASIC17.82■□□□□ 0.44
RAB3BP20337 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC17.82■□□□□ 0.44
RAB3BP20337 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
RAB3BP20337 LBX2-AS1-202ENST00000603175 2083 ntBASIC17.82■□□□□ 0.44
RAB3BP20337 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RAB3BP20337 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
RAB3BP20337 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RAB3BP20337 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RAB3BP20337 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC17.82■□□□□ 0.44
RAB3BP20337 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC17.81■□□□□ 0.44
RAB3BP20337 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
RAB3BP20337 AC138932.1-201ENST00000534164 6830 ntBASIC17.81■□□□□ 0.44
RAB3BP20337 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
RAB3BP20337 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RAB3BP20337 AP000974.1-201ENST00000623909 2387 ntBASIC17.81■□□□□ 0.44
RAB3BP20337 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RAB3BP20337 SNX3-202ENST00000349379 890 ntTSL 2 BASIC17.81■□□□□ 0.44
RAB3BP20337 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
RAB3BP20337 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RAB3BP20337 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC17.81■□□□□ 0.44
RAB3BP20337 QDPR-206ENST00000508623 601 ntTSL 3 BASIC17.81■□□□□ 0.44
RAB3BP20337 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC17.81■□□□□ 0.44
RAB3BP20337 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.81■□□□□ 0.44
RAB3BP20337 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC17.81■□□□□ 0.44
RAB3BP20337 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
RAB3BP20337 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC17.81■□□□□ 0.44
RAB3BP20337 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC17.81■□□□□ 0.44
RAB3BP20337 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RAB3BP20337 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
RAB3BP20337 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
RAB3BP20337 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RAB3BP20337 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC17.81■□□□□ 0.44
RAB3BP20337 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC17.8■□□□□ 0.44
RAB3BP20337 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
RAB3BP20337 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
RAB3BP20337 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC17.8■□□□□ 0.44
RAB3BP20337 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms