Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
KRT3P12035 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
KRT3P12035 PARL-206ENST00000435888 1098 ntTSL 5 BASIC21.51■■□□□ 1.03
KRT3P12035 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC21.51■■□□□ 1.03
KRT3P12035 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
KRT3P12035 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
KRT3P12035 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
KRT3P12035 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
KRT3P12035 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
KRT3P12035 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
KRT3P12035 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
KRT3P12035 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC21.51■■□□□ 1.03
KRT3P12035 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC21.51■■□□□ 1.03
KRT3P12035 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
KRT3P12035 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
KRT3P12035 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
KRT3P12035 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
KRT3P12035 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC21.5■■□□□ 1.03
KRT3P12035 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
KRT3P12035 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC21.5■■□□□ 1.03
KRT3P12035 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
KRT3P12035 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC21.5■■□□□ 1.03
KRT3P12035 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
KRT3P12035 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
KRT3P12035 CNN2P6-201ENST00000439038 900 ntBASIC21.5■■□□□ 1.03
KRT3P12035 CASP6-205ENST00000505486 538 ntTSL 4 BASIC21.5■■□□□ 1.03
KRT3P12035 AL162412.1-201ENST00000567129 965 ntBASIC21.5■■□□□ 1.03
KRT3P12035 PLLP-204ENST00000569059 665 ntTSL 3 BASIC21.5■■□□□ 1.03
KRT3P12035 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC21.5■■□□□ 1.03
KRT3P12035 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC21.5■■□□□ 1.03
KRT3P12035 FAM21FP-204ENST00000608637 956 ntBASIC21.5■■□□□ 1.03
KRT3P12035 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
KRT3P12035 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC21.5■■□□□ 1.03
KRT3P12035 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
KRT3P12035 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC21.5■■□□□ 1.03
KRT3P12035 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC21.5■■□□□ 1.03
KRT3P12035 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
KRT3P12035 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
KRT3P12035 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
KRT3P12035 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
KRT3P12035 AC020907.5-201ENST00000624372 1936 ntBASIC21.49■■□□□ 1.03
KRT3P12035 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
KRT3P12035 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
KRT3P12035 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
KRT3P12035 VMO1-204ENST00000441199 741 ntTSL 2 BASIC21.49■■□□□ 1.03
KRT3P12035 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
KRT3P12035 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC21.49■■□□□ 1.03
KRT3P12035 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
KRT3P12035 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
KRT3P12035 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
KRT3P12035 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC21.49■■□□□ 1.03
KRT3P12035 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC21.49■■□□□ 1.03
KRT3P12035 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC21.49■■□□□ 1.03
KRT3P12035 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC21.48■■□□□ 1.03
KRT3P12035 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC21.48■■□□□ 1.03
KRT3P12035 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC21.48■■□□□ 1.03
KRT3P12035 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC21.48■■□□□ 1.03
KRT3P12035 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC21.48■■□□□ 1.03
KRT3P12035 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
KRT3P12035 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
KRT3P12035 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
KRT3P12035 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
KRT3P12035 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
KRT3P12035 PBX1-209ENST00000485769 834 ntTSL 2 BASIC21.48■■□□□ 1.03
KRT3P12035 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
KRT3P12035 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
KRT3P12035 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
KRT3P12035 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC21.48■■□□□ 1.03
KRT3P12035 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
KRT3P12035 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
KRT3P12035 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC21.48■■□□□ 1.03
KRT3P12035 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC21.48■■□□□ 1.03
KRT3P12035 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC21.47■■□□□ 1.03
KRT3P12035 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC21.47■■□□□ 1.03
KRT3P12035 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
KRT3P12035 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
KRT3P12035 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
KRT3P12035 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
KRT3P12035 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
KRT3P12035 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
KRT3P12035 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC21.47■■□□□ 1.03
KRT3P12035 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC21.47■■□□□ 1.03
KRT3P12035 AC016405.3-201ENST00000607710 860 ntBASIC21.47■■□□□ 1.03
KRT3P12035 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
KRT3P12035 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
KRT3P12035 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
KRT3P12035 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
KRT3P12035 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
KRT3P12035 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
KRT3P12035 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
KRT3P12035 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
KRT3P12035 AC068338.2-201ENST00000563278 1430 ntBASIC21.46■■□□□ 1.03
KRT3P12035 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC21.46■■□□□ 1.03
KRT3P12035 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
KRT3P12035 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC21.46■■□□□ 1.03
KRT3P12035 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC21.46■■□□□ 1.03
KRT3P12035 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
KRT3P12035 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
KRT3P12035 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
KRT3P12035 GLI3-203ENST00000437480 451 ntTSL 2 BASIC21.46■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms