Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC21.43■■□□□ 1.02
RARAP10276 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
RARAP10276 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RARAP10276 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
RARAP10276 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC21.43■■□□□ 1.02
RARAP10276 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC21.43■■□□□ 1.02
RARAP10276 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
RARAP10276 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
RARAP10276 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC21.42■■□□□ 1.02
RARAP10276 PARP1-202ENST00000366792 553 ntTSL 3 BASIC21.42■■□□□ 1.02
RARAP10276 STX7-201ENST00000367937 1090 ntTSL 5 BASIC21.42■■□□□ 1.02
RARAP10276 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
RARAP10276 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
RARAP10276 USP39-204ENST00000409766 2033 ntTSL 2 BASIC21.42■■□□□ 1.02
RARAP10276 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RARAP10276 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC21.42■■□□□ 1.02
RARAP10276 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC21.42■■□□□ 1.02
RARAP10276 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC21.42■■□□□ 1.02
RARAP10276 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC21.42■■□□□ 1.02
RARAP10276 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
RARAP10276 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
RARAP10276 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RARAP10276 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
RARAP10276 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RARAP10276 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
RARAP10276 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
RARAP10276 DBI-210ENST00000542275 757 ntTSL 5 BASIC21.41■■□□□ 1.02
RARAP10276 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC21.41■■□□□ 1.02
RARAP10276 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC21.41■■□□□ 1.02
RARAP10276 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
RARAP10276 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
RARAP10276 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC21.41■■□□□ 1.02
RARAP10276 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC21.4■■□□□ 1.02
RARAP10276 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RARAP10276 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
RARAP10276 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
RARAP10276 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RARAP10276 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
RARAP10276 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RARAP10276 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
RARAP10276 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC21.4■■□□□ 1.02
RARAP10276 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
RARAP10276 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC21.4■■□□□ 1.02
RARAP10276 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC21.4■■□□□ 1.02
RARAP10276 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC21.4■■□□□ 1.02
RARAP10276 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC21.4■■□□□ 1.02
RARAP10276 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
RARAP10276 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
RARAP10276 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC21.4■■□□□ 1.02
RARAP10276 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC21.4■■□□□ 1.02
RARAP10276 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
RARAP10276 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC21.4■■□□□ 1.02
RARAP10276 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
RARAP10276 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
RARAP10276 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RARAP10276 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
RARAP10276 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
RARAP10276 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC21.39■■□□□ 1.02
RARAP10276 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
RARAP10276 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
RARAP10276 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RARAP10276 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
RARAP10276 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RARAP10276 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
RARAP10276 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC21.39■■□□□ 1.01
RARAP10276 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC21.39■■□□□ 1.01
RARAP10276 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
RARAP10276 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC21.39■■□□□ 1.01
RARAP10276 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
RARAP10276 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RARAP10276 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC21.39■■□□□ 1.01
RARAP10276 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC21.39■■□□□ 1.01
RARAP10276 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RARAP10276 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
RARAP10276 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
RARAP10276 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
RARAP10276 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
RARAP10276 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RARAP10276 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC21.38■■□□□ 1.01
RARAP10276 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
RARAP10276 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC21.38■■□□□ 1.01
RARAP10276 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RARAP10276 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC21.38■■□□□ 1.01
RARAP10276 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC21.38■■□□□ 1.01
RARAP10276 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RARAP10276 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
RARAP10276 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC21.38■■□□□ 1.01
RARAP10276 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RARAP10276 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
RARAP10276 AC099778.1-201ENST00000568593 1911 ntBASIC21.38■■□□□ 1.01
RARAP10276 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC21.38■■□□□ 1.01
RARAP10276 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
RARAP10276 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC21.38■■□□□ 1.01
RARAP10276 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RARAP10276 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC21.38■■□□□ 1.01
RARAP10276 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC21.38■■□□□ 1.01
RARAP10276 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC21.38■■□□□ 1.01
RARAP10276 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
RARAP10276 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
RARAP10276 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms