Protein–RNA interactions for Protein: P09603

CSF1, Macrophage colony-stimulating factor 1, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1P09603 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
CSF1P09603 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
CSF1P09603 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
CSF1P09603 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CSF1P09603 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CSF1P09603 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CSF1P09603 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CSF1P09603 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC17.58■□□□□ 0.4
CSF1P09603 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
CSF1P09603 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
CSF1P09603 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CSF1P09603 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CSF1P09603 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CSF1P09603 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
CSF1P09603 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CSF1P09603 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CSF1P09603 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC17.57■□□□□ 0.4
CSF1P09603 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC17.57■□□□□ 0.4
CSF1P09603 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC17.57■□□□□ 0.4
CSF1P09603 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
CSF1P09603 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CSF1P09603 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CSF1P09603 JTB-203ENST00000368589 1216 ntTSL 2 BASIC17.57■□□□□ 0.4
CSF1P09603 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CSF1P09603 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CSF1P09603 AC006455.2-201ENST00000429931 906 ntBASIC17.57■□□□□ 0.4
CSF1P09603 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CSF1P09603 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC17.57■□□□□ 0.4
CSF1P09603 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC17.57■□□□□ 0.4
CSF1P09603 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
CSF1P09603 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC17.57■□□□□ 0.4
CSF1P09603 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC17.57■□□□□ 0.4
CSF1P09603 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC17.57■□□□□ 0.4
CSF1P09603 AC233992.3-201ENST00000607491 485 ntBASIC17.57■□□□□ 0.4
CSF1P09603 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CSF1P09603 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CSF1P09603 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CSF1P09603 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CSF1P09603 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CSF1P09603 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CSF1P09603 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC17.57■□□□□ 0.4
CSF1P09603 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CSF1P09603 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CSF1P09603 AC116562.4-201ENST00000641316 2276 ntBASIC17.56■□□□□ 0.4
CSF1P09603 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC17.56■□□□□ 0.4
CSF1P09603 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CSF1P09603 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC17.56■□□□□ 0.4
CSF1P09603 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC17.56■□□□□ 0.4
CSF1P09603 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CSF1P09603 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC17.56■□□□□ 0.4
CSF1P09603 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CSF1P09603 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
CSF1P09603 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CSF1P09603 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC17.56■□□□□ 0.4
CSF1P09603 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC17.56■□□□□ 0.4
CSF1P09603 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC17.56■□□□□ 0.4
CSF1P09603 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
CSF1P09603 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CSF1P09603 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CSF1P09603 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CSF1P09603 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CSF1P09603 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CSF1P09603 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CSF1P09603 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CSF1P09603 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CSF1P09603 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CSF1P09603 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CSF1P09603 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC17.56■□□□□ 0.4
CSF1P09603 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC17.56■□□□□ 0.4
CSF1P09603 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CSF1P09603 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CSF1P09603 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CSF1P09603 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CSF1P09603 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CSF1P09603 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC17.55■□□□□ 0.4
CSF1P09603 AK1-201ENST00000223836 736 ntTSL 3 BASIC17.55■□□□□ 0.4
CSF1P09603 BX842568.3-201ENST00000418104 571 ntBASIC17.55■□□□□ 0.4
CSF1P09603 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC17.55■□□□□ 0.4
CSF1P09603 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CSF1P09603 MPST-208ENST00000628507 698 ntTSL 5 BASIC17.55■□□□□ 0.4
CSF1P09603 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CSF1P09603 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CSF1P09603 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CSF1P09603 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC17.55■□□□□ 0.4
CSF1P09603 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CSF1P09603 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC17.55■□□□□ 0.4
CSF1P09603 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC17.55■□□□□ 0.4
CSF1P09603 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CSF1P09603 TCF3P1-201ENST00000423021 1937 ntBASIC17.55■□□□□ 0.4
CSF1P09603 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CSF1P09603 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CSF1P09603 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CSF1P09603 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CSF1P09603 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CSF1P09603 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CSF1P09603 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
CSF1P09603 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CSF1P09603 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC17.54■□□□□ 0.4
CSF1P09603 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC17.54■□□□□ 0.4
CSF1P09603 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms