Protein–RNA interactions for Protein: P09001

MRPL3, 39S ribosomal protein L3, mitochondrial, humanhuman

Known RBP Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL3P09001 MIR939-201ENST00000401314 82 ntBASIC18.29■□□□□ 0.52
MRPL3P09001 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC18.29■□□□□ 0.52
MRPL3P09001 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
MRPL3P09001 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC18.29■□□□□ 0.52
MRPL3P09001 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC18.29■□□□□ 0.52
MRPL3P09001 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
MRPL3P09001 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
MRPL3P09001 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.29■□□□□ 0.52
MRPL3P09001 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
MRPL3P09001 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC18.29■□□□□ 0.52
MRPL3P09001 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
MRPL3P09001 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.28■□□□□ 0.52
MRPL3P09001 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
MRPL3P09001 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
MRPL3P09001 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
MRPL3P09001 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
MRPL3P09001 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.28■□□□□ 0.52
MRPL3P09001 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
MRPL3P09001 EBPL-204ENST00000378272 766 ntTSL 3 BASIC18.28■□□□□ 0.52
MRPL3P09001 AC012414.1-201ENST00000556676 535 ntBASIC18.28■□□□□ 0.52
MRPL3P09001 AL355001.2-201ENST00000620617 1191 ntBASIC18.28■□□□□ 0.52
MRPL3P09001 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
MRPL3P09001 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC18.28■□□□□ 0.52
MRPL3P09001 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
MRPL3P09001 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
MRPL3P09001 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
MRPL3P09001 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
MRPL3P09001 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC18.28■□□□□ 0.52
MRPL3P09001 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
MRPL3P09001 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
MRPL3P09001 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC18.28■□□□□ 0.52
MRPL3P09001 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
MRPL3P09001 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.27■□□□□ 0.52
MRPL3P09001 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC18.27■□□□□ 0.52
MRPL3P09001 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
MRPL3P09001 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
MRPL3P09001 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
MRPL3P09001 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
MRPL3P09001 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
MRPL3P09001 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
MRPL3P09001 NT5C3AP1-201ENST00000394500 1012 ntBASIC18.27■□□□□ 0.52
MRPL3P09001 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC18.27■□□□□ 0.52
MRPL3P09001 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC18.27■□□□□ 0.52
MRPL3P09001 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC18.27■□□□□ 0.52
MRPL3P09001 AC008175.2-201ENST00000612840 297 ntBASIC18.27■□□□□ 0.52
MRPL3P09001 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
MRPL3P09001 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
MRPL3P09001 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.27■□□□□ 0.52
MRPL3P09001 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.27■□□□□ 0.51
MRPL3P09001 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
MRPL3P09001 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
MRPL3P09001 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
MRPL3P09001 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
MRPL3P09001 AIRN-201ENST00000601203 4374 ntBASIC18.26■□□□□ 0.51
MRPL3P09001 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
MRPL3P09001 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.26■□□□□ 0.51
MRPL3P09001 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
MRPL3P09001 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC18.26■□□□□ 0.51
MRPL3P09001 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.26■□□□□ 0.51
MRPL3P09001 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
MRPL3P09001 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
MRPL3P09001 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.26■□□□□ 0.51
MRPL3P09001 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
MRPL3P09001 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
MRPL3P09001 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC18.26■□□□□ 0.51
MRPL3P09001 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC18.26■□□□□ 0.51
MRPL3P09001 AC091305.1-201ENST00000479476 895 ntBASIC18.26■□□□□ 0.51
MRPL3P09001 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
MRPL3P09001 TPRG1LP1-201ENST00000598702 760 ntBASIC18.26■□□□□ 0.51
MRPL3P09001 AC110285.6-201ENST00000617652 491 ntBASIC18.26■□□□□ 0.51
MRPL3P09001 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
MRPL3P09001 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
MRPL3P09001 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
MRPL3P09001 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
MRPL3P09001 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
MRPL3P09001 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
MRPL3P09001 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.26■□□□□ 0.51
MRPL3P09001 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
MRPL3P09001 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.26■□□□□ 0.51
MRPL3P09001 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
MRPL3P09001 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
MRPL3P09001 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
MRPL3P09001 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
MRPL3P09001 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
MRPL3P09001 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.25■□□□□ 0.51
MRPL3P09001 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
MRPL3P09001 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
MRPL3P09001 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
MRPL3P09001 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
MRPL3P09001 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
MRPL3P09001 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC18.25■□□□□ 0.51
MRPL3P09001 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC18.25■□□□□ 0.51
MRPL3P09001 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC18.25■□□□□ 0.51
MRPL3P09001 MIR6084-201ENST00000622012 110 ntBASIC18.25■□□□□ 0.51
MRPL3P09001 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
MRPL3P09001 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
MRPL3P09001 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
MRPL3P09001 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
MRPL3P09001 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
MRPL3P09001 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms